BtaINT0113432 @ bosTau6
Intron Retention
Gene
ENSBTAG00000011922 | PLEC
Description
plectin [Source:HGNC Symbol;Acc:HGNC:9069]
Coordinates
chr14:2054917-2066373:+
Coord C1 exon
chr14:2054917-2055454
Coord A exon
chr14:2055455-2066311
Coord C2 exon
chr14:2066312-2066373
Length
10857 bp
Sequences
Splice sites
5' ss Seq
CAGGTAGCT
5' ss Score
6.52
3' ss Seq
CCTGGCCTTGTCTCTCCCAGATG
3' ss Score
11.07
Exon sequences
Seq C1 exon
ATGGTGGCCGGCATGTTCATGCCGCTGGACCAGCTGCGGGCCATTTATGAGGTGCTTTTCCGAGAGGGCGTGATGGTGGCCAAGAAGGACCGGCGGCCCCGCAGCCTGCACCCTCACGTGCCCGGAGTCACCAACCTCCAGGTCATGCGCGCCATGGCCTCCCTGAGGGCACGGGGCCTGGTGCGGGAGACCTTCGCCTGGCGCCACTTTTACTGGTACCTGACCAACGAGGGCATTGCCCACCTGCGCCAGTACCTGCACCTGCCCCCGGAGATCGTGCCTGCCTCTCTGCAGCGTGTGCGCCGCCCCGTGGCCATGGTGATGCCTGCGCGCCGCACCCCCCATGTGCAGGCCGTGCAGGGTCCCCTGGGCTGCCCGCCCAAGCGGGGGCCGCCACCCACCGAGGACCCTGCCCGAGAGGAGCGGTGCGTCTACCGCCGGAAGGAGCCTGAGGAGGGGGCACCAGAGCCCCCTGTGGTGCCTGCCGCCACCCCAGGGACCCTGGCGAGGCAGGGGCTGGAGCCTGCCCCACCCACAG
Seq A exon
GTAGCTGCACCCTGCCCCCAGCTGGAGGGCAGGGGTGTGGGGGCCTGGGCCTGGTGGGTGGGGTGCAGGGCCTGGGCCTGGTGGACGGGGTGGGCAGCAGGTGTGCAAAAGCTCTGCTCCTGCCGGCAGGCGGCGCGCTCTCTGCCAGGGCACTCTTGCCAGCGGACGCCAGGGCTCCTCCTCCTGGCTTGAGGATCTTGGGGTGGGTAGGCCAAGAAGGAGCCCGTGGGTTACTGCCACCCATAGCCAGGCACACCCTGGGGCTGGGGGTGGGGCTCGCGGTTCTTGGACTGGCGGGACCAGCTGTCGGCACAGCCCTGGCCGGCACCCTGGGCCCTCTTGCCAGCATCACCCTCGTCCTGTGCCCTGCCCGCCCCCTCCCTGCCCCAGGGATTTGTCTGCTCCAGGCTCTCTCTGCAGGGGGTGGGGGCGTGCAGAGGGGGTGCTGGGATGGGACAGGGTACAGCCACTCTCCAAGTGGAGATGACTGCCTGGTCTTTCTGAGCCATGGGTTTGTCCACTGGGGGTGACATCTGCCCCCCTGTTGTGTGGCACAGATGTGATATGGTGGCTGGGTGCTTGGTCAGCCTGGGGTGGGTGACAGCCTAGCAGGCAGCCCTGGGCCGGGACAGGAAGAGCAGACCCGTGGCCGCGGCAGTGCAGGGCTCTGCCTGGGGTCTAGGCGGATCCATCCCAGGGAGACCTGGGTCCCAGAGGATGGACTGGGTCCTGTTGTCCCAGGGGCCGGCACCTTGTGCTGTGCCCCGCACTGTGGCAGCCCCCTGTCCCTAAGGACCTGTGCTGCACCACCCAGGTGGGCAGAGGGTAGCGGGCAGCTCAGGCTCACACCTGTGCTTCTGAGCTCACCAGCCTCCGTGTTGAGTGGGGGCAGCAGATTCCCAGCACAGGGTGGACTCCATGTCTCTCGAGCTGGGGAGGAATGTGGTCTCTGGGGGTGGGTGGGGACCTGGGGTGAGGCTAGCAGGGTGGACAGGAGTTTGCCAGGTGGATGAGTGGGGGGTCAGGGGACCCAGGCGCAGGCCCAGGTCGGGCCTGGACCCACTAACTAGGGCCCAGGCGTGGGAGCCCATCTGGGGGGGTCAGGGAGGTTGTGGGTGGCGAGGCTCACCACGTGGCCTCTCCCGCACCTGTCAGTAAGGTGACCGTGTCCCCCACCAGAGACAGTAGTGCTGGGCTGGGCAGCGGTCAGCTCTGACAGCACCTGATGGACGGTCTCCACCCGGCCTCCTCCCTGACCATCGCCTTGATGGGGCCCCTGCCCCAATCTGGCTGGCAGAGCAGACCCTCCCCCTTCCTGGGTCGTGGGTGTGGGGAGCATGGACCCCCTCCTTTTCTCTCCTTCCTTCCTTTTCTGTGGCTTGGCTGGGCTGGCGCTGGGCTGAGCGGCTGGGCGGGCAGTTGGCCGTGGGCCAGGAGGGGGGACTGGGTGTGGCTCAGCGAGCAGGGGGGGGGCGCCCCCAGCCCTGAGCGGGTGACTCAGTCTTCCCTTCCCGGCCGCAGCAGCCGCCGCCGGTGGCAGCTCAGAGTTTCCAACAGGAAATGAGTTCCAGCTCCAGGCTGAGTCAGGGCCGGAGGGCGTGGGCTCCCCCTTCCCCTCGGTCCCCCAGGCTGAGCGGGATCTGAGCACCACCCTGGGCACAAGAGGACGCCCAGGGCACCTCGGGTGCTGGGTGGGGCACAGGGCTTTGGCCAGGTCTGTAGGGGTCCTGATGGCTTGGCTAGGAAGGTTCTGATGACATTGGGAACTGTCGACTTCTCAGAGTTTTAAACATTATCAAGTGCGGCTTCCCTGGTGGTCCAGTGGCTGTGACTCTGCGCTCCCAAAAGTGGCTGTGACTCTGCGCTCCCAAAGCAGAGGCTACTTTCAGTCCCTGGTCAGGAAACTAGGTCTGACAGGCCCCAACGGAGACCTGGCACGGCCAAATTAAATGAAGAAATAAATACTTTAAAAGTTATCCAGCGATGTGCCACAGACCCCTCACTTGCTCACAGCATCGCCCCTCTGGTCCGTCTGCAGAAGGGCAGGTCAGCACGTGGGCCCAGCTGCCACGCTCATCACAGTGGCCTTGCTCAGGTGGACCGCCTCTGCCCGGCCAACCCCAGCCAGGGAGCCACAGACCCCTTCCCCTGTGCCATGGTGGTCTGCTCATCCATGTGGGAAGGTGTCCACTTGCTTGTTCTGCCACTTACCAGTCAGTCCCAGGCTGAGTTCCTGGCCGGAAGCCCCCAGCATGTGGGATGGATGGGCTGGGTGAAGAGCAAGTGGTCCTGGAGGGCCCCTGTGAGAGACGCCCTGAGCTGAGCCCTGACCAAGGAGGACGGCACTCAGGGAGCTGCCAGAAGGACCGACAGGGTTCCTCTGGGGTTACTGGAAAGATGGACCCAGGGGGAGTGGGTTTCATACATGAATTTCATTTCTCAATGAGCCTGGCTCAAAACTCAGAAAGAACTGGAACTTCAGTAGAGAAGAGGTGCCGTCCGAACACGCTCACCCCTGTGCTCCAGCAGCCTCTATGCTGCGGGTGCAGGTGCCCTGCAAGGCTGGCTGCTCCTGGCCACGCCACGCACCTGACTGTCCCATGGGCTTGTCCGCAGGCGCAGAGCCCTGCTGCTCCCTTTCACAGCACGTGGCGCCCCTGCCAGCCCTCCATTAGTCTCCAGTTTTGTGTCCGGTTGTCTGCAGGGAGACCCGTAGAACTCTGGCGGGTTTTCTAAGCAGGTTACAGTACGATTAGGTTTGTCTTTTACCAGGTCTCGCGGTGGTTGGGCAGTCCAACAGCGCAGAAAAAGTGCAGAGGTTGGTACTTAGCTAGGAGATGTCCCTTTGTCAAGGCTGAAGGCCTGGAGGATGAGGCAGGGGATGGGTCTAGGAGGGGCTGGGGTGGTGCAGACTTCTGGGGCCAGTGCTGGGTGGGGAGGCTGCTGGGTGGGTGGGCTGGGCCGGCAGGCAGAGGAGGGCCCTCCAGCCACACCTGAGGGCTCAGGGATTGCAGGCGGGCTGGTCCGACCCGTCGGTCCACTGGGCTTCACTCTGCCCGGCTCGCTGACTAAGGGGTGGCCGTGAGGAGGAGCCAGGCTCCCAGAGCTGGGTGGAGAGGCCTCGGCTCTGGAGAGCCCTCCCTTTGCCTCCCACCCTTTCCCTCCTTCCTGCCTTCCCTTCCTCTCCTCTCTGCCGCTCCAGAGCAGCCAGGCTCATGGTCGGCAGCTATGGACAGGTACAGCATGGAGGAGCTGATTCAGCTGGGCCAAGGTAGGGCAGGGCTGGGCCAGGGTCAGGCCAGGGTGCAGGTCTTCAGAAGGGAGGGGTCCAGGCCTCCAGCTGGGGCTCTGCTTTCCCCACCAGCCTGTGGCCGGGGCCCTGCAGGGGCAGGACCGCAGATTCCGGATGAGCATGGCTCTGTCTAGAGATGCTGCCTGTGGTGTGTCTGGGGCGGGATGGACGTGTCTCGGGGCGCCAGGCCTTGCCCCAGACTTCCATGCCTCCAGGAGCTGGTTCCCCCTGGTGTTGGAGCATGGAGTCCTCCGAGGTGGAGCCCAGCCCTGGCCTTCAGAGCTGTCCCCTGCAGGCCGGTTTCCTTCAGAATTGTTTCTGAAGCATGGGGTTGATGGGCAGGAGGCTTGGGTGGGCCTGGCCCTCCACCCCCACCCCGTTGCCCCTGGCCTCCCCACGTGGGCCGGGGTACCCCTTCCCTGGCAGCCAGAGGCCTAGTATGGTTTGCTGTGCTCTGCTGCCGGCTGCCCACACGCTCCAGGCAGTCGACCAGGGCTGATGTCACGGCCTTGGGTGGCTGGGGTGTTCCTCGCCGGTTCTGTGCCTCAGTTTCCTCAACTGTGTGGTGCGGTGATGCGCAGGGCTTACTCCTTGGAGTTCTCAGAGGGTCAGACTAGAATGGCCCCTGCGGGCTTCCTCCATGGGGTTCTGAGGGTCAGACTTGACAGGGAGGAGGGGGTGGGACCGCGACCTCCACCTGCTGTTTCCTGAGCGCACCTTGGCCCTGGGGACGTCTGAGCCCCGCCCCCCCCCACCGGCTTCCAGGGTCTGTGTGGGCCTGGGGCCGGCACCTGGGCATCCTGGGTTGCGGGGGAGGCCCGGCCCGATCTGGCCTGAGACCTGACCTTGGGAGGCCGTCCCGCCCGTCCGTCTGGGCCAGGTGTTGTTTGGTGACCTGCCGGGGGCGGGGGTGGTGGTGCTTGCCAGGGTGGCCTTTCCCAGTGCTCCCCCACTGTCGTCCACGTCCCGCGGGGTGGGCAGGGTGGGAGCTGCAGGCCTTTCAACAGGGACGGGAGCCCCCAGGCCCGAGGGCCACCCTGCTCCCAGGTGGGCCCCGACACCCAAGGCTTCCCCTGTTGGACTCACCGTGGGAGCGGGCCTGGCGCCGGTGCCCTGGCTCCGCACGTCATGTTCTAAGTCGGGACAGATGACGGGCCTGGCCTGCCCTCCTGGGATATTTATATCCGCGGGCCCCCTGCCCACCCCCTCCCCCACGGACACAGCTCTGCTGACAGCAGCAGCACCGTGCCCTCCTCCACGCACCGCCGCGCTTGCTGCCGCCTCCGAGGGGCCTGTGACCCTCCCAGCACCCACACCCACTCGCTGTCGGACCCGTGGGCCCCGCCGCTGTCCCCAATGAAGATTGTGCCGGGTAGGTGGGGCTGCCTCTGAGAGCCCAGCGGGCGCTGCGGGGGCCCACCCCCTCCCTGTCTGCTGTCCGCGGAGGGGTGGGGGACGTCGGGTTTCCCTGTCTTTGACAACGGTTGGGTCCGCTGCGAGCCTGGAGGCCAGCGAGGACCGGGGCGCTGGCAGCTGTCCCCAGGGGCACCCTTGGAGGCAGAATGGGGTGCTGGGCGTCACGGTCACCCGCTGTGGGGGCGGGGGAGGCCCGTGTGAGGCCGCGAGGGCCCGGGCTGGGCTGGGGGTGGGGGGGCTGCGCTCAGCCAGGCGTCCCTGCAGGCCCCTCCTCCTGGCGGGTGTGGCCGCGGGTGAGCAGGGGTTAAGGCTCCGCTAACCTTGAGCGTGCGAGCGGCGCAGGGCCCGCGGAGCGGCGCCTCCGTGGGAGGTGGGGCGGGTGGGGAGCGCGAGTGGCCGGAGCGGGAGGGAGGCGCGGCCGGGAGAGCAGTTGGTGCGGCGGCGGAGGCCGACAGCGGTCGGGCGGTCCCGCAGAGGGCGGTCCCTGGTCCCGGGCACCCCCAGCCGTCCTCAGCTTCCTCGGGGAAGGAAGGGGGGCTGCCCGGCTTCGAGTAGCCCTTCCGAAGGGCGGCTGCGCCTGCCAGCGCTCAGGCCGGCGCCTCCAGAGCCATGGAGCCCTCGGGCAGCCTGTTTCCTTCCCTCGTGGTCGTGGGCCACGTCGTCACCCTGGCCGCCGTGTGGCACTGGCGCAGGGGGCGCCCGCGGGTGCAGGATGAGCAAGGTAAGGCCGCTGGTGGCCACCCCCGAGGCTGCTGTTTATTGCCGCCACCCGGCCAGGGGGCTGAGGGCGGGGCGGGCGAGGGGCCGCCTCCCTCCCGCCCCTAAATTTCCCTATGCCCGCCCCTTCCTGTCCTGGAGGCTCGCGCGGGCACTTGGCCAGACAAGGTGTGGACCCCCCGGCCCCGCACCCTGTGCTGAAGACCCCGCCTGCTTGTCTGGGCAGGGCCGGGACTCTGCCTCCGTCAGCCTGGAGTCCGCTGCTGGGCAGGGCGTGAAGGGAGGGCTGCGGGAGGTCTGGGCAGCTGGGGAGGGGGCGGCAAGGGGCAGGGGCTTTCCGTCCGGGAGGGAGGCCCCTCCCTAGCAGCCCATATGGGGCGAGCACAGGTGACTGGCAACACAGAAACCGCAGCGGGCAGGTGCAGGCGTCCCGTGGACTGAGGCGGGGCCGCCGCAGGAGGTGGGGCTGCGGGAGCTGGACAGGTGCCTGAGCGCCCTTGACCAGGGCCCAGTAACGCCTCGGGGACTGGCGGCTGGGCTTACCCTGCCTTCCCCCGGCTCGAGGTCACCCGCTCGAGGCTATAGCCCTCGGCAGTGGCGCCCGGCCCAGGACTGGGTGGAGCCTGCCTCCACTCCAGTGAATGAGCAGGGGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCGGCCCCCGCGGCCTTCCCGGGCGCTCACGGAGACGGGTGCCCCCTCCGGCACCACCGCCCCTCCAGCCACACCCACCTACGCAGCACAGCTGCCTGTAGAGGTAGCCCCTGCGCGCCTGCTCGCAGCCCCCATCCAGCCAGCACGGCCGTTCCAGCACGACCTCCTTCTGCGCGGCGAAAGAGACGCCCGCCCCCCGTATGCCGGGCGCAGCCATGAGCCCGGCGCCCTGCGGACAGCAAACAGGACGGCGCGTCGGCTCCCGGCCCACGCGCGAGGCCGCCGGCTCCGCGTGCCACACCCTCCCCCGCCGGGCCGAACGCTGAGAGCCTGCCCCCGGCGGGCGCCCCGCCCCACGGAGACCTGGAAGCCGCGCCCCCGCTTGGAGGGAGAGGACCCGGCTGGGCCTGGGGGCAGCAGGGGAGGCTGCGGCCCCAGGATAGAGGCTGGGAACTGCCCGAGCCTGGCGTTCCCGGGACGAGCTCCAGCTCCCGCAGGATTCGCGGGAAAGCCCAGGTGTGCGGAGCAGGGGGCTGAGAACTGAGCAGAAGCACCGAAAAGGGGCGCCAAGGGCAGCAGGACCAGGGAGCGGCCGAAGGGGAGCTCCGTGCCCACGTGGGCACAGGAGACAAAAGCTGAGGGAGGGAGGGCCAAACCGAGGCAGGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCTTCTTATCCCGGGAGCGGCCCCACTAACTAGATTCTTGCCTTAGTTTCCAAATCTGTGAAAGGGCGCAACGCTACCCTTCAGAGGGCCGCGGGCAGCTCTGGGGGATACTGGCCTGGTGGACAGGGCAGGAGCCGCAGTGCTGGGGAGGGCCAGCCGAGATGTGCAGCAGCCTGGCGCGGGCTGCGCGGCTGGGCCGGCAGGGGAGGGGTGGGTGGTCTCTTGACTTGAGGGCCTGAATAGGATGACGGATAGGATGGACGGGGAAGGGCGCATCCTACAGCCAAGGATGAGGGACTGGCCGGCAGGGCCGCAGGGAGCACCTGAGAGGACACTCTCTGAGATCCCGGAGGGGAGTCTGGAGGCAGCAGGGCATGGTGGGGAGAGGGAGCTGGGCTTGGGAGGTGGAGGTGGAACCCTGTCCTGGATAGCAAGCCAATATCCTTGGAGCCCTTGAGTGACAGAGAAGACGCTGGAGAGGGGCTTGGGGGGGGGGGGGTGGGGACTCCCGCAGCTTGGACGCCCGGCTGGGATGCCTGGCAGTGGGTGTGAGCCATCCTTGGTGACCCTACACTGGGGCGCTGGCCGGCGTGGGGTCTGATGTGGGATCCTGGAGCAGCTCTGTGGGGTGAAGGGCTCATGTGTGGGGCCTCTCCGGGCCCTGCGTAGAAGGGGGGGGGTCTGTCCAGAGTAGGGGAGCGAGGTGACCTGCCGCAGGGCCCCTGGGGTAGGTGTGGGGGTAGTCAGCTCCACCTGGTCCGGGGTGGGGGGGGGGTCCCCTACCCCCTGGGGTGTGGGCGCCCCCGTGTGGCCAGAGAAGGGCTGCGGCTGGGTGGGGTGAGCCTTTCCTGGAAACGAGGCCCGAGGCGCCATGTGGGTGGGGCAGCAGCTCCCAGCTGGATCGCATCAAGCCAAGTCTCCGACTGGAAAATTCTGTGGTCAGGGCGATGCATTCTTTCCTGCAGTGGCTGGGCAGCTGGGCAGTGCGCGGCCAGGGCTGCGGTGTACGAGATGAGAGGGAGCCGGGCGGCACCCCTGTGCCCTTTGTCCTACCACCTTTACAACCTGAGTGGCTGATATCCGTGCGCCCCGCCCGCCTGCAAACAGCCCCCCACCCAGGCTGCCCCCAGTGCCCTAGGTGCGGCTTTCTTGCCTGTGAGTCATCCTGCCTTCGCCCTCTCCCCTCCCCTGACTCACTGGCTGGGCCCCCTTAGGGTGCTCCCCTCTGACCTGCGGCCCCCCTCCCTGACTCGGGGCAGAGTTCTGCAGCTCAGGGCTGGGCGGTCCTGCCTGGTGAGTCAGCGCTCAGCTATGCGCCCCCTCCTGCCCCTCGGAGCACTCTGCCTTCGGATGGGGGCACTGCTCCAGGACAGGCTTGGTGGGCGCTTGGGAGGGGTCCAGCCCTCACTGGAGCCTGGTGGCCCTGGAGCCAGGGGTATAGGTGGGAGCCTAGCAGGGTGTAGGGTGTAGGGTGTTTGGGTCTCTGAGGGGTGATTTCGGAGGGCTTCCAGGGAAGGCAGCCGGCCCCGCCCCCAAGCCAGGTGTCACTCCCCTTGGGGGTCCCTCCTTAGAGCCCCTCCGCCCGGCAGTTTGGGCACGCATGGGGCGGCCCTGGGTCAAGTCTGAGCTGGTGCCCCCCCCCAAGACGCGTGACCTTGGGCTCCCTGGCCCAGTGGCACTCAGGCACCCCTCCCTGAGGGGCCCCCTTTGGAGTGGCCCTGGGCACGGTGTGCGGTTCCCTGTGACCCGACACTTGTCTGTGTGCCGTGAGGTGCAGGTCCCCTGGCACCCGGGTTCCTTGAGGGGCTGCTGCGGGCAGGGTGGGTAAGGAAACCCCTGGGTTTCCTGTTTCTGCCCGGCTGTAGGTGTGGCCATGGGGGAGGGGCTGCCTTCCTGCTTCCCGCTGGGACACTCCTTCTCTGGGGGTGTGCAGGCTGGGGTGGGGCTCCGGGGGCGGGGACAGCGGCTAGGGAGTTCCGTGGGCAGGGAGTGGCCCGCACTGGGCTCCAGCGGAGCTGAGTGAGCAGAGCCCACCGAGCGAGTGCGCTGTGCCCGTGCCGAGCACCTCTGCCGTGGAGTACCCCGCGGCCGCGAGCGCAGCACTTGGGGTGGGCCAGAGTGCTGAAGGGGCAGGGCGGCACCATGTCTCAGCAGCGGCTGCGGGTGCCCGAGCCCGAGGGCCTGGGTCACAAGAGGACCAGCTCGGAGGACAACCTCTACCTGGCCGTTCTCAGGGCCTCAGAGGGCAAGAAAGGTAGCGGGACTCTGCACCGCAGGGCGGGGCAGGCGCGGGACAGGAAGGGCCCAGTTCCTGCCGCAGGAAGCCTGGCATTGGGTGGGGTGGGGCCCAGACTGTGAGGCTCTGAATTTAGGGGACAGACTCTAATACCAGCGTTGGCCCAGGTGCAGAGTTGCTGGGGGGCCAGCCAACCATGCCCAACACAGAGAGGCTGGCGGGGGCCTCTGGGCCTTGGGTAGTGGGGGGCGGAGGGCTCTCCATGCCCTGGGAAAGGCCCGCCATCCTGCGGGGGGACAGAGGCTCCCCTCGTCCAGCCCTGCCCAGTCTGGGTCCAGGCCTGCTCAGGCCGAGGCAGCCTGTGTGGGGGTGGGGCAGGCCAGGACTTGTGTGCTGTGCCTCCAGGTGTGGCTGTAGCTCCAGAACCTCCCATCTTGGGAGACCTAGCAGTGGGCACCCGCAGGCCCGGCCCCCGGCTTCCATCCAGGACTGTCCGGGGCCTTGTTGGGCGGGGGCAGTGTGATTCTGAGGCCCTCTTCAGTGGCACCGCCACTGTGTCTGCATGGCGGTCACCTCCTGGGGCTTGCGGGGCTTCTCCCAGGCCCAGGTAACCTGGCCTTGTCTCTCCCAG
Seq C2 exon
ATGAGCGGGACCGTGTGCAGAAGAAAACCTTCACCAAGTGGGTCAATAAGCACCTCATCAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000011922:ENSBTAT00000015828:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.483 A=NA C2=0.429
Domain overlap (PFAM):
C1:
PF0350110=S10_plectin=WD(100=54.4)
A:
NA
C2:
PF0030726=CH=PU(12.9=61.9)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Rat
(rn6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development