DmeEX0004291 @ dm6

Exon Skipping

Gene

Description

The gene Exchange protein directly activated by cAMP is referred to in FlyBase by the symbol DmelEpac (CG34392, FBgn0085421). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (4 unique). Gene sequence location is 2R:6759715..6798941. Its molecular function is described by: guanyl-nucleotide exchange factor activity. It is involved in the biological process described with: regulation of Rap protein signal transduction. 20 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: fertile; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed within 12-18 embryonic stages, at stages throughout the pupal period.

Coordinates

chr2R:6773640-6792410:-

Coord C1 exon

chr2R:6792316-6792410

Coord A exon

chr2R:6776350-6776522

Coord C2 exon

chr2R:6773640-6773786

Length

173 bp

Sequences

Splice sites

3' ss Seq

TATTTTCAAATGTCGCTCAGCGC

3' ss Score

3.58

5' ss Seq

AAGGTAAAA

5' ss Score

8.38

Exon sequences

Seq C1 exon

TTTTTCGCGCCGGCGAGCAGGGACGCTTCTGGTATGCAGTGCTCGGCGGATCGCTGGAGGTGCGATACCATGCCCACGCCGATGCCGATGGCAAG

Seq A exon

CGCAATTTGAATATGCACAACTGGCCGAGTGTCCGAAATCCACAAACTGAATTCCAGTGGCACCGTGAGTGAGTGAGTGAGCGAGAGGGCGTCACGAGAGACAAGGAGGGAAAATGCTATTTCGTCGCAGTTGTACGTATAACGTGGAGCAATCAACGCGACATTATGCAAAG

Seq C2 exon

AGCGCAGTTACTCTGTGCAACCTGGGCGTGGGTGCCACATTCGGGGAGTCCGTACTGCATGACTTGCCGCGGGACAGCACCGTAGTGACGAAGACCACCTGCGAGCTGCTGCGGGTGGAGCAGCAGGACTTTCGACTCATCTGGGAG

VastDB Features

Vast-tools module Information

Secondary ID

FBgn0085421_CASSETTE2

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. ATG)