DreEX0003572 @ danRer10
Exon Skipping
Gene
ENSDARG00000063578 | DGKI
Description
diacylglycerol kinase, iota [Source:HGNC Symbol;Acc:HGNC:2855]
Coordinates
chr4:4611968-4612818:-
Coord C1 exon
chr4:4612793-4612818
Coord A exon
chr4:4612567-4612604
Coord C2 exon
chr4:4611968-4612088
Length
38 bp
Sequences
Splice sites
3' ss Seq
AAAACACTCTGCTTTTACAGCTC
3' ss Score
8.01
5' ss Seq
GCGGTAAGC
5' ss Score
8.99
Exon sequences
Seq C1 exon
TGTCCCTCTGACATCAGATGAGCAAG
Seq A exon
CTCTGCTGTCGGCGGCTGCGAAAGGGGACTTGACTGCG
Seq C2 exon
GTGTCATCGTCCTGCAGGAGTGGGCTTAGTCTGCTGGTGCGGGACGCTATGGGCTGCACCGCTCTGCATTTGGCTGCACATCACGGACACGCAGACGTGGTGAGCTTCATTCTGGAGCATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSDARG00000063578-'32-40,'32-39,33-40
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.300 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF127962=Ank_2=FE(9.3=100)
A:
PF127962=Ank_2=FE(12.4=100)
C2:
PF127962=Ank_2=FE(41.2=100)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]