HsaEX0073794 @ hg19

Exon Skipping

Gene

ENSG00000197037 | ZNF498

Description

zinc finger protein 498 [Source:HGNC Symbol;Acc:21961]

Coordinates

chr7:99220172-99230022:+

Coord C1 exon

chr7:99220172-99220263

Coord A exon

chr7:99221680-99221803

Coord C2 exon

chr7:99226814-99230022

Length

124 bp

Sequences

Splice sites

3' ss Seq

GCAATCTCCTATTGTTGCAGGGG

3' ss Score

7.34

5' ss Seq

CAGGTAAGA

5' ss Score

10.77

Exon sequences

Seq C1 exon

CACTACCTGTTCTGCAGGCGGGTCCTGGCCTCCCCGCAGTGAATCCCAGAGACCAAGAGATGGCAGCTGGGTTCTTTACTGCTGGATCGCAG

Seq A exon

GGGTTGGGGCCATTTAAAGATATGGCCCTGGCCTTCCCTGAGGAGGAGTGGAGGCATGTGACCCCAGCCCAGATAGACTGCTTTGGGGAGTATGTGGAACCGCAGGACTGCAGGGTCTCTCCAG

Seq C2 exon

GCGGTGGGAGCAAGGAAAAGGAGGCAAAACCCCCACAGGAAGACCTGAAAGGGGCGCTGGTGGCACTGACATCAGAGAGGTTTGGGGAAGCCTCTCTCCAGGGCCCTGGGCTCGGAAGGGTCTGTGAGCAGGAGCCTGGTGGCCCTGCAGGCAGTGCGCCTGGGCTTCCTCCTCCCCAGCACGGTGCCATCCCCCTGCCTGACGAAGTCAAAACCCACAGCTCCTTCTGGAAGCCTTTCCAGTGCCCTGAGTGTGGGAAAGGATTCAGTCGGAGCTCCAATCTCGTCAGGCACCAGCGAACCCACGAAGAGAAGTCTTATGGCTGTGTGGAGTGTGGGAAGGGCTTTACCCTGAGAGAATACCTGATGAAGCACCAGAGAACCCACCTGGGAAAGAGGCCCTACGTGTGCAGCGAGTGCTGGAAAACCTTCAGCCAGAGACACCACCTGGAGGTGCACCAGCGCAGCCACACTGGGGAGAAGCCCTACAAGTGCGGGGAC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000197037-'11-12,'11-11,12-12

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.968 A=0.571 C2=0.397

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=71.4)

C2:

PF0009621=zf-C2H2=WD(100=8.3),PF134651=zf-H2C2_2=WD(100=9.4),PF134651=zf-H2C2_2=WD(100=9.4),PF134651=zf-H2C2_2=WD(100=9.0),PF134651=zf-H2C2_2=WD(100=9.4),PF134651=zf-H2C2_2=WD(100=9.4)

Main Inclusion Isoform:

ENSP00000334800