HsaEX1029714 @ hg38
Exon Skipping
Gene
ENSG00000261603 | PRSS46
Description
protease, serine 46 [Source:HGNC Symbol;Acc:HGNC:37325]
Coordinates
chr3:46719583-46736429:-
Coord C1 exon
chr3:46736307-46736429
Coord A exon
chr3:46733636-46733895
Coord C2 exon
chr3:46719583-46720003
Length
260 bp
Sequences
Splice sites
3' ss Seq
TCCTACCCATGGTCCTGCAGATT
3' ss Score
9.37
5' ss Seq
AAGGTGAGT
5' ss Score
10.47
Exon sequences
Seq C1 exon
ATCCGTTAGAAGGAGCATTGAGGAGTAGATACCCACTTGCCATGGCCTGTGGGCCGGGGGATCTTCAAAGCCTTACATCTCCGCTTTCCTCTGCCAGATTAGATTATCAGCCGTCTATTGAAG
Seq A exon
ATTCAAGGACCTCAGCCTGTACTCCGTGATGGTGGGAGTCCACCAGCGCCCAGAAAATAGCACTCAGCTCCCGCTCACTCGCATGGTGATTCATAAGGATTTCAGCAATCTCATGTCTCAGGACATTGCCCTCCTAAAGCTCAGGGACTCCATCTCGTGGTCCCCCTTCGTCCAGCCTGTCTGCCTCCCTAACATCAAATTCAAGCCATCCATTGGAAGCATGTGCTGGGTAATCGGCTGGGGAACTACAGGGAAAAAAG
Seq C2 exon
GTTGACTCTGGAAGCTCCCTTGTCTGCCAAATGGACAAGACCTGGATTCAGATAGGAGTGGTAAGCTGGAGCTTTAGTTGTGGCCAGCGCCACTTCCCAGGTATCTACACCAGCACTGCCCACTTCAACCAGTGGATCAGGACTGAGGTTGCTAACATAAGGTTCATCAGTAGGGCTGGCCCTGCCTTCCTGAGCCCAGTTTTCCTCACTGGCTACATTCTACTGGGCTCCTTGAGCTCCCTGTGGCTCCTGTGAGCGGTGTTTCAAGGACAGTCCCTCCCAGAGGCTGCTTCTCCCTCCCCTCTGTTCTACCCTCAGAAGTGGAGACGAGAGGTTGCCCAGGATGGCAGGGCAGAGTGAGGGGGAGGGTCCGAGAGCCACTGTTACTTTCTGTTGTTCAATGAAGATGCTTTTGAACTTT
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000261603_MULTIEX1-2/2=C1-C2
Average complexity
C2
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
PF0008921=Trypsin=FE(65.9=100)
C2:
PF0008921=Trypsin=PD(0.1=0.0)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GTAGATACCCACTTGCCATGGC
R:
TGAGGAAAACTGGGCTCAGGA
Band lengths:
307-567
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains