HsaEX6009264 @ hg19

Exon Skipping

Gene

ENSG00000197343 | ZNF655

Description

zinc finger protein 655 [Source:HGNC Symbol;Acc:30899]

Coordinates

chr7:99158156-99172029:+

Coord C1 exon

chr7:99158156-99158318

Coord A exon

chr7:99159991-99160117

Coord C2 exon

chr7:99169868-99172029

Length

127 bp

Sequences

Splice sites

3' ss Seq

GCCAGGATGTGTTATTTCAGGAG

3' ss Score

3.35

5' ss Seq

TGGGTAAGG

5' ss Score

9.08

Exon sequences

Seq C1 exon

TGATGGTCATTGTCCTCCAGAGCAGTGATGGAGGAAATACCAGCCCAGGAAGCAGCAGGGTCACCAAGGGTCCAGTTTCAGTCTTTGGAGACCCAGTCTGAGTGTCTGTCCCCAGAGCCTCAGTTTGTGCAGGACACCGACATGGAACAGGGACTCACTGGGG

Seq A exon

GAGTTTGTGACATTCGAGGATGTGGCTGTGCACCTTACTCGAGAGGAATGGGGATACCTGGACCCTGTTCAGAGGGACCTCTACAGAGAAGTGATGTTAGAGAATTATGGGAACGTGGTCTCACTGG

Seq C2 exon

ATGGAGAGACCAGAGAAGAGAACAAGCTGTTGATTCCTAAGCAGAAAATTTCGGAAGAAGTGCATTCATACAAAGTGAGAGTAGGAAGACTCAAACACGATATTACCCAAGTTCCTGAGACTAGAGAAGTGTATAAGTCTGAGGACAGATTAGAAAGACTTCAGGAAATTCTAAGGAAATTTCTGTACCTGGAGAGAGAGTTTAGGCAAATAACAATCAGCAAGGAAACCTTCACCAGTGAGAAGAACAATGAATGTCATGAACCCGAAAAAAGCTTCAGTCTGGACTCTACTATTGATGCAGATCAGAGAGTTCTTAGAATACAGAATACCGATGACAATGATAAGTATGACATGAGCTTCAACCAGAATTCAGCCTCTGGTAAACATGAACACTTAAATCTAACAGAGGATTTTCAGAGTAGTGAATGTAAGGAAAGCTTAATGGATCTCTCCCACCTTAATAAATGGGAGAGCATCCCTAACACTGAGAAATCCTAT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000197343-'4-21,'4-11,9-21=AN

Average complexity

A_C3

Mappability confidence:

100%=100=100%

Protein Impact

In the CDS, with uncertain impact

No structure available

Features

Disorder rate (Iupred):

C1=0.924 A=0.060 C2=0.203

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF116123=T2SJ=WD(100=21.9),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF0009621=zf-C2H2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=5.8)

Main Inclusion Isoform:

ENSP00000322363