HsaEX6021127 @ hg19

Exon Skipping

Gene

ENSG00000007174 | DNAH9

Description

dynein, axonemal, heavy chain 9 [Source:HGNC Symbol;Acc:2953]

Coordinates

chr17:11772451-11778501:+

Coord C1 exon

chr17:11772451-11772570

Coord A exon

chr17:11774915-11775103

Coord C2 exon

chr17:11778266-11778501

Length

189 bp

Sequences

Splice sites

3' ss Seq

TCTGGCTTTTGAAATGGTAGGTT

3' ss Score

4.09

5' ss Seq

AAAGTACGT

5' ss Score

7.99

Exon sequences

Seq C1 exon

CACCTTAATGAAAACCTGGCAAAGCTCACAGCCAGGTTTGAGAAAGCAACAGCAGACAAACTCAAATGTCAGCAAGAAGCCGAAGTGACCGCAGTCACCATCTCCCTTGCCAACCGCCTG

Seq A exon

GTTGGAGGACTCGCTTCTGAAAACGTGAGGTGGGCAGATGCCGTGCAGAACTTCAAACAGCAGGAAAGGACGTTATGTGGAGACATTTTACTTATAACGGCTTTCATTTCCTACCTTGGCTTCTTCACAAAGAAATACCGGCAGAGCCTCCTGGACAGAACTTGGAGGCCCTACCTGAGCCAGCTGAAA

Seq C2 exon

ACTCCCATTCCAGTCACCCCAGCCCTGGATCCCCTGAGGATGCTGATGGATGATGCTGACGTGGCTGCCTGGCAGAACGAGGGCCTCCCAGCCGACCGCATGTCCGTGGAGAATGCCACCATTCTCATCAACTGTGAGCGCTGGCCACTCATGGTTGACCCTCAGCTACAAGGCATCAAATGGATCAAGAATAAATATGGTGAAGATCTCCGGGTCACGCAGATTGGTCAGAAAGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000007174-'50-52,'50-51,51-52=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.000

Domain overlap (PFAM):

C1:

PF127772=MT=FE(22.8=100),PF083176=Spc7=PD(52.2=87.5),PF0218511=HR1=PD(37.5=45.0),PF0102514=GrpE=FE(45.3=100),PF101474=CR6_interact=PD(44.4=80.0),PF097314=Mitofilin=FE(47.6=100)

A:

PF127772=MT=PD(16.9=92.1)

C2:

PF127772=MT=PD(2.9=6.3),PF0102514=GrpE=PD(18.6=20.3),PF097314=Mitofilin=PD(1.2=1.3),PF127812=AAA_9=PU(60.7=82.3)

Main Inclusion Isoform:

ENSP00000262442