HsaEX6077850 @ hg38
Exon Skipping
Gene
ENSG00000078814 | MYH7B
Description
myosin heavy chain 7B [Source:HGNC Symbol;Acc:HGNC:15906]
Coordinates
chr20:34984854-34986989:+
Coord C1 exon
chr20:34984854-34984946
Coord A exon
chr20:34985066-34985129
Coord C2 exon
chr20:34986886-34986989
Length
64 bp
Sequences
Splice sites
3' ss Seq
GGCTGCCCCTCTGCCCACAGGGC
3' ss Score
11.15
5' ss Seq
GCTGTGAGT
5' ss Score
7.39
Exon sequences
Seq C1 exon
GGCACCCTTGAGGATCAAATCATCGAGGCCAACCCTGCCATGGAGGCCTTTGGCAACGCCAAGACCCTGAGGAATGATAACTCCTCCCGCTTT
Seq A exon
GGCAAGTTCATCCGCATTCACTTTGGTCCCTCTGGGAAGCTGGCATCCGCGGATATTGACAGCT
Seq C2 exon
ACATGCTGCTTCTGTCTATGAACCCCTATGACTACCACTTCTGCAGCCAGGGCGTCATCACCGTGGACAACATGAATGATGGGGAGGAGCTCATCGCCACCGAC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000078814_MULTIEX1-1/2=C1-C2
Average complexity
C2
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.065 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0006316=Myosin_head=FE(4.4=100)
A:
PF0006316=Myosin_head=FE(3.1=100)
C2:
PF0006316=Myosin_head=FE(4.9=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AACGCCAAGACCCTGAGGAAT
R:
TGAGCTCCTCCCCATCATTCA
Band lengths:
132-196
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains