MmuEX6099888 @ mm9

Exon Skipping

Gene

ENSMUSG00000026918 | Brd3

Description

bromodomain containing 3 [Source:MGI Symbol;Acc:MGI:1914632]

Coordinates

chr2:27301099-27306069:-

Coord C1 exon

chr2:27305777-27306069

Coord A exon

chr2:27304721-27304846

Coord C2 exon

chr2:27301099-27304100

Length

126 bp

Sequences

Splice sites

3' ss Seq

ACTGCTCACTTACTCCACAGCAA

3' ss Score

8.72

5' ss Seq

AAGGTAACC

5' ss Score

9.24

Exon sequences

Seq C1 exon

ACAGCTCAAGAAGGGCGGCAAGCAGGCATCTGCGTCCTATGACTCAGAGGAAGAGGAGGAGGGCCTGCCCATGAGCTATGATGAAAAGCGACAACTTAGCCTTGACATCAACCGGCTGCCCGGCGAGAAGCTAGGGCGTGTGGTGCACATCATTCAGTCTCGGGAGCCCTCGCTTCGGGACTCAAACCCAGACGAGATTGAGATTGACTTTGAGACCCTGAAGCCAACCACGCTGCGGGAACTGGAGAGATATGTCAAGTCTTGTTTACAAAAAAAGCAGAGGAAACCATTGT

Seq A exon

CAACAAGCGGGAAGAAGCAGGCAGCCAAATCGAAAGAGGAGCTAGCTCAGGAGAAGAAAAAGGAGCTGGAGAAGCGGCTGCAGGATGTCAGTGGACAACTGAACAGCAAAAAACCCACTAAGAAAG

Seq C2 exon

AGAAGTCCGGCTCAGCTCCCTCAGGAGGCCCATCAAGGCTCAGCAGTAGCAGCTCCTCTGAGTCTGCGAGCAGTAGCTCCAGTGGATCGAGCTCCGACAGCAGTGACTCAGAGTGAACTCGGACTGGGACAGAGCTGGACAGATGGACGTGGTGCACGCCAACGCAGTGTCCCCTCCTATGGTTAATATACTTTCGTTCCATGGTGTGCAGGTTTTCTTTTACTTCAGTGTTATGATCTCTTCCAGCTGTGCTCCAGTAGGGCGGAGAGCCTCGCACGTGCACCAGACCCCATGAGAGGGCCGAGCTCTGCGAGGGGGAAATGCCTTTGCAGCTCCATTTAGTTGTTTGGAGACTGCTCCTGGGATGCTAACCTGATGGCCATAGACACGGTGGGCTGGAGGCGTGGCTGGATCTGCCCAATCCTTCCTCAGGACCAGCCTCTCCCTTAGTAACTTGAAGGAAGCTTTGCAAGGGTGTTTCTCTGGAATGGGTTCTGTGT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000026918-'26-26,'26-25,29-26=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features