MmuEX6100514 @ mm9

Exon Skipping

Gene

ENSMUSG00000002546 | Golga2

Description

golgi autoantigen, golgin subfamily a, 2 [Source:MGI Symbol;Acc:MGI:2139395]

Coordinates

chr2:32161497-32163441:+

Coord C1 exon

chr2:32161497-32161603

Coord A exon

chr2:32161680-32161836

Coord C2 exon

chr2:32161926-32163441

Length

157 bp

Sequences

Splice sites

3' ss Seq

TTGAGCTCCTTTTTCTCCAGGTG

3' ss Score

10.01

5' ss Seq

ATGGTGAGT

5' ss Score

10.13

Exon sequences

Seq C1 exon

GAGAGTACATTGCCCTTTACCAAAATCAGAGGGCGGTGCTGAAGGCTCGGCATTTGGAGAAGGAAGAATACATCAGCCGGCTGGCTCAGGACAAGGAGGAGATGAAG

Seq A exon

GTGAAGCTGCTGGAGCTCCAGGAGCTGGTGTTGAGGCTTGTGAACGAGCGCAATGAATGGCAGGGCAAGTTCCTGGCCGTCTCTCAGAACCCTGGTGACGTGCTCACCCCAGTGCCCACAGGCTCCCAGGAATTTGGTGCTGCTGACCAGCAGGATG

Seq C2 exon

ACCTCAGGGAGGTGAGCCTGGCTGACGATATAGAGCCTGCACAAGGAGAGGCAGGGGTACCTGCTCCCCATGAGAACCCTACTGCACAGCAGATCATGCAGCTGCTGCGTGAGATCCAGAACCCCCGGGAGCGGCCAGGCCTGGGTAGCAACCCTTGCATCCCCTTTTTCTACCGTGCCGATGAGAACGACGAGGTGAAGATCATGGTTGTATAAAAGACTGGCGGCCAAAGCCTCAGCAAGGGCAGCCAGAGGTTCTGCCCCAACCCACACCCTTCCTCAGCCACCCTTATCTTTATAATAATAATAAGGTCAGACTCCATCCCCTCCAGGGGCTGGGGAAGTAGCTCAGTTGGTAGAGTGCTTGCCTGCTGTGCACACAGCCTTGGGTCCCCAGTACCTCTGAAAAGGCTGATACCTGTAATTTGAGTGCTTGGGAAGTGGAGGTGGAAGAATCAGCCATCCTCATCTACCTAGTGAGTTTGAGGCCACACTGGGCTA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000002546-'35-40,'35-39,36-40=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. Stop)

No structure available

Features