Special

ENSBTAG00000030567 @ bosTau6

Biotype
protein_coding
Gene Symbol
ODF2
Description
outer dense fiber of sperm tails 2 [Source:HGNC Symbol;Acc:HGNC:8114]
Coordinates
chr11:99047692-99074785:+
Assembly
bosTau6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
3
chr11:99051106-99051108
+
35.63
67.65
0
Alternative 3'ss
40
chr11:99051069-99051108
+
63.52
65.27
0
Alternative 5'ss
0
NA
+
18.21
51.85
0
Alternative 5'ss
21
chr11:99056035-99056055
+
81.79
51.85
0
Alternative 5'ss
0
NA
+
39.74
78.44
0
Alternative 5'ss
57
chr11:99051503-99051559
+
60.26
78.44
0
Exon Skipping
233
chr11:99048584-99048816
+
19.61
70.66
0
Exon Skipping
154
chr11:99051069-99051222
+
87.06
96.81
0
Intron Retention
1330
chr11:99070409-99071738
+
32.91
71.6
0
Intron Retention
1178
chr11:99050256-99051433
+
6.32
30.74
0
Intron Retention
877
chr11:99056056-99056932
+
11.53
28.02
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000136811 ODF2 1-to-1
Human hg19 ENSG00000136811 ODF2 1-to-1
Mouse mm10 ENSMUSG00000026790 Odf2 1-to-1
Mouse mm9 ENSMUSG00000026790 Odf2 1-to-1
Rat rn6 ENSRNOG00000014584 Odf2 1-to-1
Chicken galGal4 ENSGALG00000004767 ODF2 1-to-1
Chicken galGal3 ENSGALG00000004767 ODF2 1-to-1
Zebrafish danRer10 ENSDARG00000020702 odf2b 2-to-2
Zebrafish danRer10 ENSDARG00000028900 odf2a 2-to-2
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"