Special

ENSG00000032444 @ hg38

Biotype
protein_coding
Gene Symbol
PNPLA6
Description
patatin like phospholipase domain containing 6 [Source:HGNC Symbol;Acc:HGNC:16268]
Coordinates
chr19:7534004-7561764:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
45
chr19:7553875-7553919
+
55.49
34.3
0
Alternative 3'ss
48
chr19:7553872-7553919
+
44.41
34.3
0
Exon Skipping
68
chr19:7534379-7534446
+
58.4
64.84
0
Exon Skipping
87
chr19:7535127-7535213
+
6.66
57.33
0
Exon Skipping
84
chr19:7541984-7542067
+
97.13
36.22
0
Exon Skipping
119
chr19:7555249-7555367
+
97.92
29.63
0
Intron Retention
493
chr19:7542068-7542560
+
12.86
61.62
0
Intron Retention
606
chr19:7534903-7535508
+
17.55
72.09
0
Intron Retention
510
chr19:7534240-7534749
+
49.18
84.62
0
Intron Retention
355
chr19:7535578-7535932
+
30.37
48.26
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000004565 Pnpla6 1-to-1
Mouse mm9 ENSMUSG00000004565 Pnpla6 1-to-1
Rat rn6 ENSRNOG00000000977 Pnpla6 1-to-1
Cow bosTau6 ENSBTAG00000032137 PNPLA6 1-to-1
Chicken galGal4 ENSGALG00000007881 PNPLA6 1-to-1
Chicken galGal3 ENSGALG00000007881 PNPLA6 1-to-1
Zebrafish danRer10 ENSDARG00000010773 pnpla6 1-to-1
Fruitfly dm6 FBgn0003656 sws 2-to-1