Special

ENSMUSG00000004565 @ mm10

Biotype
protein_coding
Gene Symbol
Pnpla6
Description
patatin-like phospholipase domain containing 6 [Source:MGI Symbol;Acc:MGI:1354723]
Coordinates
chr8:3515384-3544267:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
40.16
40.15
0
Alternative 3'ss
3
chr8:3516507-3516509
+
59.84
40.15
0
Alternative 3'ss
90
chr8:3524011-3524100
+
62.12
70.37
0
Alternative 3'ss
102
chr8:3523999-3524100
+
37.26
70.37
0
Exon Skipping
117
chr8:3537767-3537883
+
21.18
64.45
0
Exon Skipping
117
chr8:3537969-3538085
+
84.42
73.42
0
Exon Skipping
62
chr8:3516507-3516568
+
50.88
62.13
0
Exon Skipping
66
chr8:3537627-3537692
+
5.03
27.14
0
Exon Skipping
85
chr8:3521919-3522003
+
1.12
75.76
0
Intron Retention
1124
chr8:3515557-3516680
+
21.78
46.43
0
Intron Retention
131
chr8:3523868-3523998
+
20.28
100
0
Intron Retention
448
chr8:3537521-3537968
+
19.16
56.1
0
Intron Retention
3205
chr8:3538086-3541290
+
22.07
83.33
0
Intron Retention
327
chr8:3516750-3517076
+
17.01
33.36
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000032444 PNPLA6 1-to-1
Human hg19 ENSG00000032444 PNPLA6 1-to-1
Rat rn6 ENSRNOG00000000977 Pnpla6 1-to-1
Cow bosTau6 ENSBTAG00000032137 PNPLA6 1-to-1
Chicken galGal4 ENSGALG00000007881 PNPLA6 1-to-1
Chicken galGal3 ENSGALG00000007881 PNPLA6 1-to-1
Zebrafish danRer10 ENSDARG00000010773 pnpla6 1-to-1
Fruitfly dm6 FBgn0003656 sws 2-to-1