Special

ENSG00000044459 @ hg38

Biotype
protein_coding
Gene Symbol
CNTLN
Description
centlein [Source:HGNC Symbol;Acc:HGNC:23432]
Coordinates
chr9:17134982-17503923:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
50.43
100
0
Alternative 3'ss
3
chr9:17409293-17409295
+
49.57
100
0
Exon Skipping
105
chr9:17333850-17333954
+
1.45
25.58
0
Exon Skipping
92
chr9:17388162-17388253
+
99.4
26.94
0
Exon Skipping
142
chr9:17389961-17390102
+
8.19
49.31
0
Exon Skipping
202
chr9:17427048-17427249
+
7.55
100
0
Exon Skipping
195
chr9:17309058-17309252
+
95.99
61.18
0
Exon Skipping
50
chr9:17444197-17444246
+
8.59
34.76
0
Exon Skipping
134
chr9:17273733-17273866
+
95.68
86.46
0
Exon Skipping
101
chr9:17366617-17366717
+
97.65
34.38
0
Exon Skipping
123
chr9:17411465-17411587
+
1.87
58.72
0
Exon Skipping
113
chr9:17166818-17166930
+
6.05
32.14
0
Intron Retention
15484
chr9:17487067-17502550
+
8.99
60.33
0
Intron Retention
10705
chr9:17298353-17309057
+
12.13
52.08
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000038070 Cntln 1-to-1
Mouse mm9 ENSMUSG00000038070 Cntln 1-to-1
Rat rn6 ENSRNOG00000006721 AABR07049064.1 1-to-2
Rat rn6 ENSRNOG00000043151 Cntln 1-to-2
Cow bosTau6 ENSBTAG00000001847 CNTLN 1-to-1
Chicken galGal4 ENSGALG00000015097 1-to-2
Chicken galGal4 ENSGALG00000028298 1-to-2
Chicken galGal3 ENSGALG00000015097 CNTLN 1-to-2
Zebrafish danRer10 ENSDARG00000033345 cntln 1-to-1