Special

ENSG00000107147 @ hg38

Biotype
protein_coding
Gene Symbol
KCNT1
Description
potassium sodium-activated channel subfamily T member 1 [Source:HGNC Symbol;Acc:HGNC:18865]
Coordinates
chr9:135702185-135795508:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
42
chr9:135742772-135742813
+
6.4
17.32
0
Exon Skipping
100
chr9:135750942-135751041
+
89.69
24.35
0
Exon Skipping
79
chr9:135752379-135752457
+
7.25
19.24
0
Exon Skipping
63
chr9:135788100-135788162
+
59.85
95.16
0
Intron Retention
1161
chr9:135758509-135759669
+
70.58
51.2
0
Intron Retention
913
chr9:135777511-135778423
+
6.18
23.37
0
Intron Retention
4553
chr9:135779471-135784023
+
6.26
25.1
0
Intron Retention
142
chr9:135784619-135784760
+
4.94
22.5
0
Intron Retention
420
chr9:135784890-135785309
+
15.52
26.58
0
Intron Retention
866
chr9:135785331-135786196
+
45.62
59.68
0
Intron Retention
2895
chr9:135751042-135753936
+
16.76
56.41
0
Intron Retention
3634
chr9:135788163-135791796
+
11.13
32.35
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000058740 Kcnt1 1-to-1
Mouse mm9 ENSMUSG00000058740 Kcnt1 1-to-1
Rat rn6 ENSRNOG00000017283 Kcnt1 1-to-1
Cow bosTau6 ENSBTAG00000018975 KCNT1 1-to-1
Chicken galGal4 ENSGALG00000001645 Segment 1-to-1
Chicken galGal3 ENSGALG00000001645 KCNT1 1-to-1
Zebrafish danRer10 ENSDARG00000079484 kcnt1 1-to-2
Zebrafish danRer10 ENSDARG00000104868 KCNT1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0261698 CG42732 2-to-1
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