Special

ENSRNOG00000017283 @ rn6

Biotype
protein_coding
Gene Symbol
Kcnt1
Description
potassium sodium-activated channel subfamily T member 1 [Source:RGD Symbol;Acc:621106]
Coordinates
chr3:3310954-3365340:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
49
chr3:3351145-3351193
+
25.15
36.19
0
Alternative 3'ss
55
chr3:3351139-3351193
+
73.79
32.15
0
Alternative 5'ss
0
NA
+
86.62
23.76
0
Alternative 5'ss
59
chr3:3349013-3349071
+
13.38
23.76
0
Exon Skipping
42
chr3:3330032-3330073
+
8.05
35
0
Exon Skipping
63
chr3:3360053-3360115
+
56.06
98.13
0
Exon Skipping
98
chr3:3336312-3336409
+
3.1
18.37
0
Exon Skipping
173
chr3:3353965-3354137
+
97.87
25.64
0
Intron Retention
4107
chr3:3325925-3330031
+
6.29
100
0
Intron Retention
936
chr3:3341052-3341987
+
16.45
37.57
0
Intron Retention
1452
chr3:3346787-3348238
+
20.14
44.42
0
Intron Retention
211
chr3:3349013-3349223
+
13.72
29.03
0
Intron Retention
1156
chr3:3349989-3351144
+
74.91
61.84
0
Intron Retention
996
chr3:3352969-3353964
+
14.2
55
0
Intron Retention
641
chr3:3354138-3354778
+
19.45
45.01
0
Intron Retention
726
chr3:3357750-3358475
+
25.56
32.61
0
Intron Retention
2046
chr3:3336837-3338882
+
39.36
54.38
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000107147 KCNT1 1-to-1
Human hg19 ENSG00000107147 KCNT1 1-to-1
Mouse mm10 ENSMUSG00000058740 Kcnt1 1-to-1
Mouse mm9 ENSMUSG00000058740 Kcnt1 1-to-1
Cow bosTau6 ENSBTAG00000018975 KCNT1 1-to-1
Chicken galGal4 ENSGALG00000001645 Segment 1-to-1
Chicken galGal3 ENSGALG00000001645 KCNT1 1-to-1
Zebrafish danRer10 ENSDARG00000079484 kcnt1 1-to-2
Zebrafish danRer10 ENSDARG00000104868 KCNT1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0261698 CG42732 2-to-1