Special

FBgn0261698 @ dm6

Biotype
protein_coding
Gene Symbol
CG42732
Description
The gene slowpoke 2 is referred to in FlyBase by the symbol DmelSLO2 (CG42732, FBgn0261698). It is a protein_coding_gene from Dmel. It has 10 annotated transcripts and 10 polypeptides (9 unique). Gene sequence location is 2R:10322195..10416996. Its molecular function is described by: calcium-activated potassium channel activity; outward rectifier potassium channel activity; intracellular sodium activated potassium channel activity. It is involved in the biological process described with: potassium ion transmembrane transport; potassium ion transport. 21 alleles are reported. The phenotypes of these alleles manifest in: mesothoracic tergum; ganglion mother cell; trichogen cell. The phenotypic classes of alleles include: phenotype; increased mortality; increased mortality during development; some die during P-stage.
Coordinates
chr2R:10322195-10416996:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
60.68
97.06
0
Alternative 5'ss
75
chr2R:10328783-10328857
-
39.32
97.06
0
Exon Skipping
177
chr2R:10326362-10326538
-
71.86
100
0
Exon Skipping
555
chr2R:10330701-10331255
-
4.18
26.32
0
Exon Skipping
312
chr2R:10333633-10333944
-
24.39
71.62
0
Exon Skipping
602
chr2R:10388134-10388735
-
35.05
93.43
0
Exon Skipping
194
chr2R:10357515-10357708
-
15.37
100
0
Intron Retention
6367
chr2R:10388736-10395102
-
53.07
60.41
0
Intron Retention
951
chr2R:10333945-10334895
-
7.91
71.43
0
Intron Retention
1265
chr2R:10332368-10333632
-
11.03
58.91
0
Intron Retention
231
chr2R:10331825-10332055
-
11.61
88.41
0
Intron Retention
53
chr2R:10329634-10329686
-
2.94
65.85
0
Intron Retention
2244
chr2R:10326539-10328782
-
23.57
63.93
0
Intron Retention
467
chr2R:10325895-10326361
-
19.83
79.11
0
Intron Retention
871
chr2R:10324319-10325189
-
18.62
36.1
0
Intron Retention
62
chr2R:10339241-10339302
-
7
34.88
0
Intron Retention
56
chr2R:10339110-10339165
-
8.47
78.95
0
Intron Retention
61
chr2R:10338965-10339025
-
6.28
67.9
0
Intron Retention
1502
chr2R:10337120-10338621
-
7.64
33.22
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000107147 KCNT1 1-to-2
Human hg38 ENSG00000162687 KCNT2 1-to-2
Human hg19 ENSG00000107147 KCNT1 1-to-2
Human hg19 ENSG00000162687 KCNT2 1-to-2
Mouse mm10 ENSMUSG00000052726 Kcnt2 1-to-2
Mouse mm10 ENSMUSG00000058740 Kcnt1 1-to-2
Mouse mm9 ENSMUSG00000052726 Kcnt2 1-to-2
Mouse mm9 ENSMUSG00000058740 Kcnt1 1-to-2
Rat rn6 ENSRNOG00000013312 Kcnt2 1-to-2
Rat rn6 ENSRNOG00000017283 Kcnt1 1-to-2
Cow bosTau6 ENSBTAG00000016729 KCNT2 1-to-2
Cow bosTau6 ENSBTAG00000018975 KCNT1 1-to-2
Chicken galGal4 ENSGALG00000001645 Segment 1-to-2
Chicken galGal3 ENSGALG00000001645 KCNT1 1-to-2
Zebrafish danRer10 ENSDARG00000075812 kcnt2 1-to-3
Zebrafish danRer10 ENSDARG00000079484 kcnt1 1-to-3
Zebrafish danRer10 ENSDARG00000104868 KCNT1 (2 of 2) 1-to-3