Special

ENSG00000162687 @ hg38

Biotype
protein_coding
Gene Symbol
KCNT2
Description
potassium sodium-activated channel subfamily T member 2 [Source:HGNC Symbol;Acc:HGNC:18866]
Coordinates
chr1:196225779-196609225:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
10.36
21.73
0
Alternative 3'ss
5
chr1:196316022-196316026
-
89.64
21.73
0
Alternative 5'ss
0
NA
-
22.19
17.33
0
Alternative 5'ss
26
chr1:196317148-196317173
-
77.81
17.33
0
Exon Skipping
183
chr1:196405959-196406141
-
4.75
58.03
0
Exon Skipping
50
chr1:196343056-196343105
-
8.39
34.29
0
Exon Skipping
112
chr1:196305234-196305345
-
93.44
24.07
0
Exon Skipping
21
chr1:196273468-196273488
-
21.98
57.36
0
Exon Skipping
109
chr1:196373140-196373248
-
89.9
29.63
0
Exon Skipping
72
chr1:196319484-196319555
-
10.21
55.1
0
Exon Skipping
122
chr1:196317148-196317269
-
34.32
77.26
0
Exon Skipping
117
chr1:196567586-196567702
-
7.02
23.88
0
Exon Skipping
191
chr1:196228532-196228722
-
2.08
36
0
Exon Skipping
170
chr1:196408195-196408364
-
3.1
46.67
0
Exon Skipping
150
chr1:196342079-196342228
-
96.49
41.03
0
Intron Retention
2738
chr1:196423114-196425851
-
9.76
33.33
0
Intron Retention
7161
chr1:196319556-196326716
-
30.65
68.11
0
Intron Retention
22365
chr1:196258495-196280859
-
18.5
48.73
0
Intron Retention
3092
chr1:196479239-196482330
-
8.25
21.62
0
Intron Retention
10110
chr1:196469069-196479178
-
11.09
29.34
0
Intron Retention
1307
chr1:196428270-196429576
-
8.99
36.48
0
Intron Retention
30911
chr1:196342229-196373139
-
12.1
34.59
0
Intron Retention
3457
chr1:196316027-196319483
-
37.54
75.4
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000052726 Kcnt2 1-to-1
Mouse mm9 ENSMUSG00000052726 Kcnt2 1-to-1
Rat rn6 ENSRNOG00000013312 Kcnt2 1-to-1
Cow bosTau6 ENSBTAG00000016729 KCNT2 1-to-1
Chicken galGal4 ENSGALG00000002451 KCNT2 1-to-1
Chicken galGal3 ENSGALG00000002451 KCNT2 1-to-1
Zebrafish danRer10 ENSDARG00000075812 kcnt2 1-to-1
Fruitfly dm6 FBgn0261698 CG42732 2-to-1