Special

ENSG00000107147 @ hg19

Biotype
protein_coding
Gene Symbol
KCNT1
Description
potassium channel, subfamily T, member 1 [Source:HGNC Symbol;Acc:18865]
Coordinates
chr9:138594031-138684992:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
93.96
11.11
0
Alternative 3'ss
9
chr9:138651516-138651524
+
6.04
11.11
0
Exon Skipping
42
chr9:138634618-138634659
+
6.64
17.65
0
Exon Skipping
100
chr9:138642788-138642887
+
89.86
26.37
0
Exon Skipping
79
chr9:138644225-138644303
+
7.24
20.78
0
Exon Skipping
63
chr9:138679946-138680008
+
59.88
95.16
0
Intron Retention
12208
chr9:138594215-138606422
+
83.03
19.29
0
Intron Retention
35377
chr9:138606567-138641943
+
7.81
22.37
0
Intron Retention
913
chr9:138669357-138670269
+
6.17
23.37
0
Intron Retention
192
chr9:138670342-138670533
+
7.66
35.62
0
Intron Retention
4553
chr9:138671317-138675869
+
6.27
25.1
0
Intron Retention
142
chr9:138676465-138676606
+
4.92
22.5
0
Intron Retention
420
chr9:138676736-138677155
+
15.5
26.58
0
Intron Retention
866
chr9:138677177-138678042
+
45.67
59.67
0
Intron Retention
5275
chr9:138678368-138683642
+
25.94
93.6
0
Intron Retention
2895
chr9:138642888-138645782
+
17.38
61.19
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000058740 Kcnt1 1-to-1
Mouse mm9 ENSMUSG00000058740 Kcnt1 1-to-1
Rat rn6 ENSRNOG00000017283 Kcnt1 1-to-1
Cow bosTau6 ENSBTAG00000018975 KCNT1 1-to-1
Chicken galGal4 ENSGALG00000001645 Segment 1-to-1
Chicken galGal3 ENSGALG00000001645 KCNT1 1-to-1
Zebrafish danRer10 ENSDARG00000079484 kcnt1 1-to-2
Zebrafish danRer10 ENSDARG00000104868 KCNT1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0261698 CG42732 2-to-1