Special

ENSMUSG00000058740 @ mm9

Biotype
protein_coding
Gene Symbol
Kcnt1
Description
potassium channel, subfamily T, member 1 [Source:MGI Symbol;Acc:MGI:1924627]
Coordinates
chr2:25719315-25773793:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
81.93
34.99
0
Alternative 3'ss
36
chr2:25748613-25748648
+
18.07
34.99
0
Alternative 3'ss
0
NA
+
25.89
36.19
0
Alternative 3'ss
6
chr2:25758879-25758884
+
74.11
36.19
0
Alternative 5'ss
0
NA
+
82.42
63.34
0
Alternative 5'ss
59
chr2:25756518-25756576
+
17.58
63.34
0
Exon Skipping
42
chr2:25737716-25737757
+
5.7
19.57
0
Exon Skipping
112
chr2:25763565-25763676
+
93.67
48.87
0
Exon Skipping
151
chr2:25763699-25763849
+
6.49
12.17
0
Exon Skipping
64
chr2:25755743-25755806
+
95.42
19.2
0
Exon Skipping
72
chr2:25762795-25762866
+
94.81
38.2
0
Exon Skipping
63
chr2:25768175-25768237
+
42.76
97.1
0
Intron Retention
1387
chr2:25754356-25755742
+
15.06
35.9
0
Intron Retention
211
chr2:25756518-25756728
+
14.15
19.05
0
Intron Retention
1368
chr2:25757511-25758878
+
26.61
40.78
0
Intron Retention
5831
chr2:25737758-25743588
+
15.52
25.62
0
Intron Retention
169
chr2:25762867-25763035
+
15.96
36.29
0
Intron Retention
287
chr2:25764827-25765113
+
27.99
37.64
0
Intron Retention
739
chr2:25765807-25766545
+
24.31
43.91
0
Intron Retention
1990
chr2:25744379-25746368
+
51.13
62.27
0
Intron Retention
65
chr2:25747929-25747993
+
17.41
31.46
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000107147 KCNT1 1-to-1
Human hg19 ENSG00000107147 KCNT1 1-to-1
Rat rn6 ENSRNOG00000017283 Kcnt1 1-to-1
Cow bosTau6 ENSBTAG00000018975 KCNT1 1-to-1
Chicken galGal4 ENSGALG00000001645 Segment 1-to-1
Chicken galGal3 ENSGALG00000001645 KCNT1 1-to-1
Zebrafish danRer10 ENSDARG00000079484 kcnt1 1-to-2
Zebrafish danRer10 ENSDARG00000104868 KCNT1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0261698 CG42732 2-to-1