Special

ENSMUSG00000058740 @ mm10

Biotype
protein_coding
Gene Symbol
Kcnt1
Description
potassium channel, subfamily T, member 1 [Source:MGI Symbol;Acc:MGI:1924627]
Coordinates
chr2:25863734-25918273:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
33
chr2:25893129-25893161
+
82.48
34.99
0
Alternative 3'ss
69
chr2:25893093-25893161
+
17.18
34.99
0
Alternative 3'ss
0
NA
+
26.1
36.19
0
Alternative 3'ss
6
chr2:25903359-25903364
+
73.9
36.19
0
Alternative 5'ss
0
NA
+
83.17
64.92
0
Alternative 5'ss
59
chr2:25900998-25901056
+
16.83
64.92
0
Exon Skipping
42
chr2:25882196-25882237
+
5.71
19.57
0
Exon Skipping
112
chr2:25908045-25908156
+
94.9
21.12
0
Exon Skipping
64
chr2:25900223-25900286
+
94.97
21.05
0
Exon Skipping
72
chr2:25907275-25907346
+
95.9
19.34
0
Exon Skipping
63
chr2:25912655-25912717
+
44.27
96.55
0
Intron Retention
1387
chr2:25898836-25900222
+
14.21
35.9
0
Intron Retention
1368
chr2:25901991-25903358
+
24.77
42.53
0
Intron Retention
169
chr2:25907347-25907515
+
14.56
36.29
0
Intron Retention
287
chr2:25909307-25909593
+
26.13
45.32
0
Intron Retention
739
chr2:25910287-25911025
+
22.36
44.98
0
Intron Retention
1990
chr2:25888859-25890848
+
45.54
81.96
0
Intron Retention
65
chr2:25892409-25892473
+
16.72
31.92
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000107147 KCNT1 1-to-1
Human hg19 ENSG00000107147 KCNT1 1-to-1
Rat rn6 ENSRNOG00000017283 Kcnt1 1-to-1
Cow bosTau6 ENSBTAG00000018975 KCNT1 1-to-1
Chicken galGal4 ENSGALG00000001645 Segment 1-to-1
Chicken galGal3 ENSGALG00000001645 KCNT1 1-to-1
Zebrafish danRer10 ENSDARG00000079484 kcnt1 1-to-2
Zebrafish danRer10 ENSDARG00000104868 KCNT1 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0261698 CG42732 2-to-1