Special

ENSMUSG00000040690 @ mm9

Biotype
protein_coding
Gene Symbol
Col16a1
Description
collagen, type XVI, alpha 1 [Source:MGI Symbol;Acc:MGI:1095396]
Coordinates
chr4:129725084-129776527:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
48
chr4:129750313-129750360
+
70.64
88.88
0
Exon Skipping
45
chr4:129758679-129758723
+
88.97
86.42
0
Exon Skipping
100
chr4:129726571-129726670
+
5.95
75.63
0
Intron Retention
2501
chr4:129757865-129760365
+
32.19
82.87
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000084636 COL16A1 1-to-1
Human hg19 ENSG00000084636 COL16A1 1-to-1
Rat rn6 ENSRNOG00000031475 Col16a1 1-to-1
Cow bosTau6 ENSBTAG00000010050 COL16A1 1-to-1
Chicken galGal4 ENSGALG00000026836 COL16A1 1-to-1
Zebrafish danRer10 ENSDARG00000009194 COL25A1 1-to-1
Fruitfly dm6 FBgn0259244 CG42342 7-to-1