ENSMUSG00000061136 @ mm9

Biotype

protein_coding

Gene Symbol

Prpf40a

Description

PRP40 pre-mRNA processing factor 40 homolog A (yeast) [Source:MGI Symbol;Acc:MGI:1860512]

Coordinates

chr2:52993738-53050318:-

Assembly

mm9

Other assemblies

mm10

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

Pre-implantation embryo development
Neural differentiation time course
Muscular differentiation time course
Spermatogenesis cell types
Reprogramming of fibroblasts to iPSCs
Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

MmuALTA0014214-1/2

Alternative 3'ss

0

NA

-

74.05

55.55

0

MmuALTA0014214-2/2

Alternative 3'ss

12

chr2:53004950-53004961

-

25.95

55.55

0

MmuALTD0011074-1/4

Alternative 5'ss

0

NA

-

42.96

83.38

0

MmuALTD0011074-2/4

Alternative 5'ss

126

chr2:53050057-53050182

-

56.77

83.38

0

MmuEX0037333

Exon Skipping

54

chr2:53018297-53018350

-

86.72

69.08

0

MmuEX0037335

Exon Skipping

80

chr2:53047482-53047561

-

3.64

17.71

1

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Human	hg38	ENSG00000196504	PRPF40A	1-to-1
Human	hg19	ENSG00000196504	PRPF40A	1-to-1
Rat	rn6	ENSRNOG00000004864	Prpf40a	1-to-1
Cow	bosTau6	ENSBTAG00000048151	PRPF40A	1-to-1
Chicken	galGal4	ENSGALG00000012526	PRPF40A	2-to-1
Chicken	galGal3	ENSGALG00000012526	PRPF40A	2-to-1
Zebrafish	danRer10	ENSDARG00000058467	prpf40a	2-to-1
Fruitfly	dm6	FBgn0031492	CG3542	2-to-1