ENSRNOG00000004864 @ rn6

Biotype

protein_coding

Gene Symbol

Prpf40a

Description

pre-mRNA processing factor 40 homolog A [Source:RGD Symbol;Acc:1311401]

Coordinates

chr3:38682146-38741113:-

Assembly

rn6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

RnoALTA0031186-1/2

Alternative 3'ss

0

NA

-

74.61

48.15

0

RnoALTA0031186-2/2

Alternative 3'ss

12

chr3:38689987-38689998

-

25.39

48.15

0

RnoALTD0023656-1/4

Alternative 5'ss

0

NA

-

53.43

95.17

0

RnoALTD0023656-2/4

Alternative 5'ss

126

chr3:38740949-38741074

-

46.41

95.17

0

RnoEX0070102

Exon Skipping

80

chr3:38738379-38738458

-

4.65

18.73

1

RnoEX0070105

Exon Skipping

54

chr3:38703245-38703298

-

73.89

79.7

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Human	hg38	ENSG00000196504	PRPF40A	1-to-1
Human	hg19	ENSG00000196504	PRPF40A	1-to-1
Mouse	mm10	ENSMUSG00000061136	Prpf40a	1-to-1
Mouse	mm9	ENSMUSG00000061136	Prpf40a	1-to-1
Cow	bosTau6	ENSBTAG00000048151	PRPF40A	1-to-1
Chicken	galGal4	ENSGALG00000012526	PRPF40A	1-to-1
Chicken	galGal3	ENSGALG00000012526	PRPF40A	1-to-1
Zebrafish	danRer10	ENSDARG00000058467	prpf40a	1-to-1
Fruitfly	dm6	FBgn0031492	CG3542	2-to-1