ENSGALG00000012526 @ galGal4

Biotype

protein_coding

Gene Symbol

PRPF40A

Description

PRP40 pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]

Coordinates

chr7:35049313-35066127:-

Assembly

galGal4

Other assemblies

galGal3

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

GgaALTA0006585-2/4

Alternative 3'ss

9

chr7:35054415-35054423

-

83.67

24

0

GgaALTA0006585-3/4

Alternative 3'ss

21

chr7:35054415-35054435

-

16.22

24.28

0

GgaEX0018933

Exon Skipping

135

chr7:35050583-35050717

-

74.15

64.01

0

GgaINT0048627

Intron Retention

843

chr7:35061532-35062374

-

9.91

42.59

0

GgaINT1022686

Intron Retention

2447

chr7:35049406-35051852

-

35.96

22.49

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Human	hg38	ENSG00000196504	PRPF40A	1-to-1
Human	hg19	ENSG00000110844	PRPF40B	1-to-2
Human	hg19	ENSG00000196504	PRPF40A	1-to-2
Mouse	mm10	ENSMUSG00000061136	Prpf40a	1-to-1
Mouse	mm9	ENSMUSG00000023007	Prpf40b	1-to-2
Mouse	mm9	ENSMUSG00000061136	Prpf40a	1-to-2
Rat	rn6	ENSRNOG00000004864	Prpf40a	1-to-1
Cow	bosTau6	ENSBTAG00000048151	PRPF40A	1-to-1
Zebrafish	danRer10	ENSDARG00000058467	prpf40a	1-to-1
Fruitfly	dm6	FBgn0031492	CG3542	1-to-1