HsaEX0020822 @ hg38
Exon Skipping
Gene
ENSG00000175497 | DPP10
Description
dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
Coordinates
chr2:115343817-115525972:+
Coord C1 exon
chr2:115343817-115343912
Coord A exon
chr2:115499510-115499604
Coord C2 exon
chr2:115525898-115525972
Length
95 bp
Sequences
Splice sites
3' ss Seq
GAATGTCTTTGTTGTTGCAGATA
3' ss Score
8.4
5' ss Seq
TTTGTAAGT
5' ss Score
7.4
Exon sequences
Seq C1 exon
ATGAACTCACAAATTCGTCAGAAACCAGATTGTCTTTGGAAGACCTCTTTAGGAAAGACTTTGTGCTTCACGATCCAGAGGCTCGGTGGATCAATG
Seq A exon
ATACAGATGTGGTGTATAAAAGCGAGAATGGACATGTCATTAAACTGAATATAGAAACAAATGCTACCACATTATTATTGGAAAACACAACTTTT
Seq C2 exon
GTAACCTTCAAAGCATCAAGACATTCAGTTTCACCAGATTTAAAATATGTCCTTCTGGCATATGATGTCAAACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000175497_MULTIEX2-3/3=C1-C2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.005 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
PF0093016=DPPIV_N=PU(10.8=56.0)
Main Skipping Isoform:
ENST00000409163fB14224
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Primers PCR
Suggestions for RT-PCR validation
F:
ACTCACAAATTCGTCAGAAACCAGA
R:
CTGTTTGACATCATATGCCAGAAGG
Band lengths:
167-262
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development