DmeEX0000575 @ dm6

Exon Skipping

Gene

Description

This gene is referred to in FlyBase by the symbol DmelCG11319 (FBgn0031835). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (2 unique). Gene sequence location is 2L:6568400..6601068. Its molecular function is described by: serine-type peptidase activity. It is involved in the biological process described with: proteolysis. 6 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: viable; fertile. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, at stages throughout the pupal period, in adult male stages.

Coordinates

chr2L:6572196-6580510:-

Coord C1 exon

chr2L:6580415-6580510

Coord A exon

chr2L:6578905-6578999

Coord C2 exon

chr2L:6572196-6572542

Length

95 bp

Sequences

Splice sites

3' ss Seq

ATTTCATTTTTTTTTTGCAGGCG

3' ss Score

10.82

5' ss Seq

TTTGTAAGT

5' ss Score

7.4

Exon sequences

Seq C1 exon

TTGGTCTCCAGCAATCCCAACCAACGGAACTGGCGCGGAATTCTCATCGCGCTGCTGGTCATCATCATTGTGCTGGCCCTGATTGTTACATCGGTG

Seq A exon

GCGAGGAGTTCCTGTACCAGGACCATTTGGGTCGCATCTGTCTGCTGAATGCAGCCAATCGCTCGGAACGTGTCCTCATGTCCAATGTGACATTT

Seq C2 exon

GTGCCGCCGGAGTCGAAAGCTGGTCTTGGCAATGGCGGCGATATGCAACAGCAATAAACTTAAATTATGGCAGCAGAAAATTCTGATAACAAAAGTATGGAACACAACAAACTTCAACCGGAACGTGCGAACGAAATGTTTTTCTGTAAATTGCATTCAATGTGATTTATCATGAACACACCCACGACACTCACATACACAGCAAGCGGCTAAATGGCAACTCAAATAGCCAAACGGCGGCGGCGACGGCAAAAAAAGCAACAACTAAGTTAAATGGCATTTTGTGTAAAATTAATAAGCAAAGCAGCAGCAGCAGCAGCAGCGAAATGCGAAATGCGAAATGCCAA

VastDB Features

Vast-tools module Information

Secondary ID

FBgn0031835_MULTIEX1-2/12=C1-C2

Average complexity

C3

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features