HsaEX6011436 @ hg38
Exon Skipping
Gene
ENSG00000130226 | DPP6
Description
dipeptidyl peptidase like 6 [Source:HGNC Symbol;Acc:HGNC:3010]
Coordinates
chr7:154474939-154566916:+
Coord C1 exon
chr7:154474939-154475037
Coord A exon
chr7:154540532-154540626
Coord C2 exon
chr7:154566842-154566916
Length
95 bp
Sequences
Splice sites
3' ss Seq
TTCTACTTCCTCTCTTACAGATA
3' ss Score
11.59
5' ss Seq
ATTGTAAGT
5' ss Score
8.54
Exon sequences
Seq C1 exon
CGGAAGATAATAGTCTGTCTCAAAAGAAGAAGGTCACTGTAGAAGATCTCTTCAGTGAAGACTTCAAAATTCATGACCCCGAGGCTAAGTGGATAAGTG
Seq A exon
ATACAGAATTCATCTACAGAGAACAGAAAGGAACAGTGAGACTGTGGAATGTTGAAACAAATACTTCTACTGTCTTAATAGAAGGCAAAAAAATT
Seq C2 exon
GAATCATTAAGAGCCATCAGATATGAAATATCTCCAGATAGAGAGTATGCACTTTTTTCATACAATGTGGAACCC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000130226-'18-43,'18-38,21-43
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0093016=DPPIV_N=PU(1.4=14.7)
A:
PF0093016=DPPIV_N=FE(8.4=100)
C2:
PF0093016=DPPIV_N=PU(21.9=56.0)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Primers PCR
Suggestions for RT-PCR validation
F:
CGGAAGATAATAGTCTGTCTCAAAAG
R:
AGTGCATACTCTCTATCTGGAGA
Band lengths:
152-247
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains