HsaEX0074358 @ hg38
Exon Skipping
Gene
ENSG00000204946 | ZNF783
Description
zinc finger family member 783 [Source:HGNC Symbol;Acc:HGNC:27222]
Coordinates
chr7:149287565-149290038:+
Coord C1 exon
chr7:149287565-149287776
Coord A exon
chr7:149288431-149288557
Coord C2 exon
chr7:149289938-149290038
Length
127 bp
Sequences
Splice sites
3' ss Seq
CAGGCAACTTGTACTTCCAGGTG
3' ss Score
6.05
5' ss Seq
TGGGTGAGA
5' ss Score
6.04
Exon sequences
Seq C1 exon
GACTGGCATTGCGGACTGACCTCCAGGGAGAGGCCCAGATCTGATCTGCAGAGATCTCCCTTCCGGCTATCGTGGCTGCTGTTCAGGTGGTGGAGAAGAAGATGGAACCCCAGGCTGCCTGGCTACAGAGCCTGGAGGGATGCATGTGGACAGCCAAGAAGAAGCTGGCTGACTGCGAGAAGGTGGCTGTGGAGTTCGGGAACCAGCTGGAG
Seq A exon
GTGCCTGTGACTCCTGAAGACACGGTCGGGTATTTCTCAGAGCAGCAGGGTGGCGGCCTGGAGGACTCATAGAAGGAGTTCTGCAAATGTGTTGTGAAGGGGAGCTGCGACACCCTGAGCTTCCTGG
Seq C2 exon
GCCAGGCCACCACCAAGCCAGATCTGGCACCAGTGGAGAAAGGAGACAGGCAGGCAACTGCAGCCTGCCCAGTGCGGAGAGGGGCCAGAGCCCGGGCACTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000204946_MULTIEX1-8/20=7-12
Average complexity
C1*
Mappability confidence:
89%=97=90%
Protein Impact
3' UTR
No structure available
Features
Disorder rate (Iupred):
C1=0.436 A=0.696 C2=0.780
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GGAGAGGCCCAGATCTGATCT
R:
GTTGCCTGCCTGTCTCCTTTC
Band lengths:
244-371
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development