HsaEX6015425 @ hg38
Exon Skipping
Gene
ENSG00000169994 | MYO7B
Description
myosin VIIB [Source:HGNC Symbol;Acc:HGNC:7607]
Coordinates
chr2:127628372-127635880:+
Coord C1 exon
chr2:127628372-127628535
Coord A exon
chr2:127631206-127631363
Coord C2 exon
chr2:127635706-127635880
Length
158 bp
Sequences
Splice sites
3' ss Seq
ACCAGCCTCTAACCTCACAGGGC
3' ss Score
7.42
5' ss Seq
TCGATATCC
5' ss Score
-5.09
Exon sequences
Seq C1 exon
GGAGGCCCAGGGCGGGCAGAGGCTGCTGCTCTCCACGATGCATGAGGAGTACGAGTTTGTGTCACCCAGCAGTGTGGCCATCGCTGAGCTGGTGGCCCTGTTCCTGGAGGGCCTGAAGGAGAGGTCCATTTTCGCCATGGCCCTGCAGGACAGGAAGGCCACAG
Seq A exon
GGCTCCAGAGAAGGACATGGTGAGCATGGCCGTGCTGCCCCTGGCCCGTGCCCGTGGCCACCTGTGGGCCTATTCCTGCGAGCCGCTGCGACAGCCGCTGCTCAAGCGAGTCCACGCCAACGTCGACCTCTGGGACATCGCCTGCCAGATCTTTGTCG
Seq C2 exon
TGTGTCCATCACCCAGGAGCTGCCCAAGTACCTGCGCGGATTCCACAAGTGTTCGCGGGAGGATGCCATCCACCTGGCGGGCCTCATCTACAAGGCCCAGTTCAACAACGACCGGTCCCAGCTGGCTAGTGTCCCCAAGATCCTGAGGGAACTGGTGCCTGAGAACCTCACACGC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000169994_MULTIEX1-3/13=C1-10
Average complexity
C3
Mappability confidence:
95%=100=95%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=NA
Domain overlap (PFAM):
C1:
PF146041=SH3_9=PU(14.3=14.3)
A:
NO
C2:
NA
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AGTTTGTGTCACCCAGCAGTG
R:
AGGATCTTGGGGACACTAGCC
Band lengths:
255-413
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains