HsaEX6015421 @ hg38
Exon Skipping
Gene
ENSG00000169994 | MYO7B
Description
myosin VIIB [Source:HGNC Symbol;Acc:HGNC:7607]
Coordinates
chr2:127628372-127635880:+
Coord C1 exon
chr2:127628372-127628535
Coord A exon
chr2:127634176-127634426
Coord C2 exon
chr2:127635706-127635880
Length
251 bp
Sequences
Splice sites
3' ss Seq
CCAGCTGCCTCTCTGTCCAGATG
3' ss Score
8.68
5' ss Seq
GAGGTAGGT
5' ss Score
9.65
Exon sequences
Seq C1 exon
GGAGGCCCAGGGCGGGCAGAGGCTGCTGCTCTCCACGATGCATGAGGAGTACGAGTTTGTGTCACCCAGCAGTGTGGCCATCGCTGAGCTGGTGGCCCTGTTCCTGGAGGGCCTGAAGGAGAGGTCCATTTTCGCCATGGCCCTGCAGGACAGGAAGGCCACAG
Seq A exon
ATGCTGGAGGTGGTTGCCAACACACGGGTGCGGGATGTGTGTGACAGCATTGCCACCAGGCTGCAGCTGGCCTCCTGGGAGGGCTGCAGCCTCTTCATCAAGATTTCAGACAAGGTGGGCCGGGCTGGGGCTGGGCAGACGGTGGGCGGACGGGCAGTGAGCGAGGCCCTAGGTGCTGCCTGTGGGGGCCTCAGCCTACCAGGGGCACCCATGCTGGACCAGGCTGCACGGCCAGGGCTGCTGGGACAGAG
Seq C2 exon
TGTGTCCATCACCCAGGAGCTGCCCAAGTACCTGCGCGGATTCCACAAGTGTTCGCGGGAGGATGCCATCCACCTGGCGGGCCTCATCTACAAGGCCCAGTTCAACAACGACCGGTCCCAGCTGGCTAGTGTCCCCAAGATCCTGAGGGAACTGGTGCCTGAGAACCTCACACGC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000169994_MULTIEX1-7/13=C1-10
Average complexity
C3*
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=NA
Domain overlap (PFAM):
C1:
PF146041=SH3_9=PU(14.3=14.3)
A:
NO
C2:
NA
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CTGCTCTCCACGATGCATGAG
R:
AGTTCCCTCAGGATCTTGGGG
Band lengths:
292-543
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains