HsaEX6087280 @ hg38
Exon Skipping
Gene
ENSG00000151240 | DIP2C
Description
disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
Coordinates
chr10:344999-349454:-
Coord C1 exon
chr10:349331-349454
Coord A exon
chr10:348641-348762
Coord C2 exon
chr10:344999-345110
Length
122 bp
Sequences
Splice sites
3' ss Seq
ATGTTTCTCTCCTTGTGTAGGAA
3' ss Score
10.94
5' ss Seq
GAGGTAACA
5' ss Score
8.1
Exon sequences
Seq C1 exon
GGTGCGATAGCGAACTCGCTGACCTGCGTGCAGCTGCACAAGAGAGCTGAGAAGATCGCCGTGATGCTGATGGAGAGGGGCCACCTTCAGGACGGCGACCACGTGGCCTTGGTCTACCCCCCAG
Seq A exon
GAATAGACCTGATAGCAGCGTTTTATGGTTGCCTGTACGCAGGCTGTGTGCCAATAACCGTCCGTCCCCCGCACCCACAGAACATCGCGACGACGTTGCCTACCGTCAAGATGATTGTGGAG
Seq C2 exon
GTGAGTCGCTCTGCCTGTCTGATGACGACACAGCTGATCTGTAAGTTGCTGCGGTCCAGGGAGGCGGCGGCGGCTGTGGACGTCAGGACGTGGCCCCTCATCCTGGACACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000151240_MULTIEX3-12/12=11-C2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0050123=AMP-binding=FE(10.6=100)
A:
PF0050123=AMP-binding=FE(10.3=100)
C2:
PF0050123=AMP-binding=FE(16.3=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CAGCTGCACAAGAGAGCTGAG
R:
CTGTGTCCAGGATGAGGGGC
Band lengths:
206-328
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains