Special

ENSBTAG00000011741 @ bosTau6

Biotype
protein_coding
Gene Symbol
COL13A1
Description
Bos taurus collagen, type XIII, alpha 1 (COL13A1), mRNA. [Source:RefSeq mRNA;Acc:NM_001105433]
Coordinates
chr28:26253844-26406118:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
57
chr28:26345983-26346039
+
38.07
47.74
0
Exon Skipping
66
chr28:26347153-26347218
+
23.97
100
0
Exon Skipping
87
chr28:26400108-26400194
+
85.96
95.99
0
Exon Skipping
78
chr28:26401133-26401210
+
9.45
82.43
0
Exon Skipping
27
chr28:26328296-26328322
+
81.61
26.65
0
Exon Skipping
54
chr28:26370276-26370329
+
87.46
34.64
0
Exon Skipping
63
chr28:26366024-26366086
+
3.56
14.68
0
Exon Skipping
36
chr28:26388711-26388746
+
8.75
33.57
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000197467 COL13A1 1-to-1
Human hg19 ENSG00000197467 COL13A1 1-to-1
Mouse mm10 ENSMUSG00000058806 Col13a1 1-to-1
Mouse mm9 ENSMUSG00000058806 Col13a1 1-to-1
Rat rn6 ENSRNOG00000000552 Col13a1 1-to-1
Chicken galGal4 ENSGALG00000004286 COL13A1 1-to-1
Chicken galGal3 ENSGALG00000004286 COL13A1 1-to-1
Zebrafish danRer10 ENSDARG00000091398 COL13A1 1-to-1
Fruitfly dm6 FBgn0259244 CG42342 9-to-1