Special

ENSDARG00000091398 @ danRer10

Biotype
protein_coding
Gene Symbol
COL13A1
Description
collagen, type XIII, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2190]
Coordinates
chr13:7667163-7761345:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
62.89
50.76
0
Alternative 3'ss
3
chr13:7687693-7687695
+
37.11
50.76
0
Exon Skipping
72
chr13:7735391-7735462
+
48.9
69.29
0
Exon Skipping
36
chr13:7743200-7743235
+
47.59
94.85
0
Exon Skipping
87
chr13:7752399-7752485
+
73.8
76.62
0
Exon Skipping
78
chr13:7753021-7753098
+
20.61
59.59
0
Exon Skipping
27
chr13:7669874-7669900
+
78.39
47.02
0
Exon Skipping
57
chr13:7684748-7684804
+
13.84
25.79
0
Exon Skipping
42
chr13:7687157-7687198
+
51.03
73.9
0
Exon Skipping
63
chr13:7687696-7687758
+
35.65
85.19
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000197467 COL13A1 1-to-1
Human hg19 ENSG00000197467 COL13A1 1-to-1
Mouse mm10 ENSMUSG00000058806 Col13a1 1-to-1
Mouse mm9 ENSMUSG00000058806 Col13a1 1-to-1
Rat rn6 ENSRNOG00000000552 Col13a1 1-to-1
Cow bosTau6 ENSBTAG00000011741 COL13A1 1-to-1
Chicken galGal4 ENSGALG00000004286 COL13A1 1-to-1
Chicken galGal3 ENSGALG00000004286 COL13A1 1-to-1
Fruitfly dm6 FBgn0259244 CG42342 10-to-1