Special

ENSGALG00000004286 @ galGal4

Biotype
protein_coding
Gene Symbol
COL13A1
Description
collagen, type XIII, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2190]
Coordinates
chr6:10558568-10638887:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
27
chr6:10587566-10587592
+
70.67
86.55
0
Exon Skipping
66
chr6:10600651-10600716
+
21.5
98.54
0
Exon Skipping
63
chr6:10607214-10607276
+
12.35
86.03
0
Exon Skipping
45
chr6:10611149-10611193
+
30.4
84.31
0
Exon Skipping
63
chr6:10614219-10614281
+
28.54
94.92
0
Exon Skipping
99
chr6:10621074-10621172
+
91.32
75.19
0
Exon Skipping
54
chr6:10621800-10621853
+
79.24
86.94
0
Exon Skipping
27
chr6:10623171-10623197
+
96.86
26.63
0
Exon Skipping
36
chr6:10625999-10626034
+
26.98
78.18
0
Exon Skipping
87
chr6:10631307-10631393
+
90.22
98.3
0
Exon Skipping
57
chr6:10599129-10599185
+
79.23
98.65
0
Exon Skipping
27
chr6:10607883-10607909
+
12.4
83.36
0
Exon Skipping
78
chr6:10632067-10632144
+
6.75
91.89
0
Exon Skipping
42
chr6:10604246-10604287
+
99.11
27.79
0
Intron Retention
2655
chr6:10613588-10616242
+
8.27
75.62
0
Intron Retention
505
chr6:10617091-10617595
+
3.34
33.94
0
Intron Retention
541
chr6:10620533-10621073
+
4.44
29.7
0
Intron Retention
627
chr6:10621173-10621799
+
9.74
56.72
0
Intron Retention
3161
chr6:10628146-10631306
+
9.99
44.1
0
Intron Retention
3931
chr6:10631394-10635324
+
10.31
44.77
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000197467 COL13A1 1-to-1
Human hg19 ENSG00000197467 COL13A1 1-to-1
Mouse mm10 ENSMUSG00000058806 Col13a1 1-to-1
Mouse mm9 ENSMUSG00000058806 Col13a1 1-to-1
Rat rn6 ENSRNOG00000000552 Col13a1 1-to-1
Cow bosTau6 ENSBTAG00000011741 COL13A1 1-to-1
Zebrafish danRer10 ENSDARG00000091398 COL13A1 1-to-1
Fruitfly dm6 FBgn0259244 CG42342 8-to-1