Special

ENSMUSG00000058806 @ mm9

Biotype
protein_coding
Gene Symbol
Col13a1
Description
collagen, type XIII, alpha 1 [Source:MGI Symbol;Acc:MGI:1277201]
Coordinates
chr10:61300984-61441856:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
27
chr10:61358082-61358108
-
76.66
27.07
0
Exon Skipping
99
chr10:61324763-61324861
-
47.32
62.38
0
Exon Skipping
36
chr10:61316105-61316140
-
13.4
46.14
0
Exon Skipping
36
chr10:61371430-61371465
-
81.08
50.74
0
Exon Skipping
27
chr10:61368002-61368028
-
28.15
49.84
0
Exon Skipping
51
chr10:61365838-61365888
-
93.52
20.37
0
Exon Skipping
36
chr10:61359887-61359922
-
95.98
15.05
0
Exon Skipping
57
chr10:61353956-61354012
-
61.45
99.09
0
Intron Retention
1691
chr10:61354013-61355703
-
9.01
66.13
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000197467 COL13A1 1-to-1
Human hg19 ENSG00000197467 COL13A1 1-to-1
Rat rn6 ENSRNOG00000000552 Col13a1 1-to-1
Cow bosTau6 ENSBTAG00000011741 COL13A1 1-to-1
Chicken galGal4 ENSGALG00000004286 COL13A1 1-to-1
Chicken galGal3 ENSGALG00000004286 COL13A1 1-to-1
Zebrafish danRer10 ENSDARG00000091398 COL13A1 1-to-1
Fruitfly dm6 FBgn0259244 CG42342 7-to-1