ENSBTAG00000015321 @ bosTau6

Biotype

protein_coding

Gene Symbol

TRERF1

Description

transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]

Coordinates

chr23:15948727-15988075:-

Assembly

bosTau6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

BtaALTA0031199-1/2

Alternative 3'ss

0

NA

-

70.53

55.78

0

BtaALTA0031199-2/2

Alternative 3'ss

36

chr23:15954781-15954816

-

29.47

55.78

0

BtaALTD0022734-1/2

Alternative 5'ss

0

NA

-

81.8

22.8

0

BtaALTD0022734-2/2

Alternative 5'ss

60

chr23:15982842-15982901

-

18.2

22.8

0

BtaEX0037633

Exon Skipping

246

chr23:15982902-15983147

-

68.09

97.22

0

BtaEX6097546

Exon Skipping

388

chr23:15979068-15979455

-

100

0

1

BtaINT0152510

Intron Retention

3386

chr23:15979456-15982841

-

16.36

83.33

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Human	hg38	ENSG00000124496	TRERF1	1-to-1
Human	hg19	ENSG00000124496	TRERF1	1-to-1
Mouse	mm10	ENSMUSG00000064043	Trerf1	1-to-1
Mouse	mm9	ENSMUSG00000064043	Trerf1	1-to-1
Rat	rn6	ENSRNOG00000022598	Trerf1	1-to-1
Chicken	galGal4	ENSGALG00000009896	TRERF1	1-to-1
Chicken	galGal3	ENSGALG00000009896	TRERF1	1-to-1
Zebrafish	danRer10	ENSDARG00000088631	TRERF1	1-to-1