Special

ENSRNOG00000022598 @ rn6

Biotype
protein_coding
Gene Symbol
Trerf1
Description
transcriptional regulating factor 1 [Source:RGD Symbol;Acc:1307167]
Coordinates
chr9:15655735-15700312:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
65.42
43.98
0
Alternative 3'ss
36
chr9:15661472-15661507
-
34.58
43.98
0
Alternative 5'ss
0
NA
-
32.49
63.24
0
Alternative 5'ss
60
chr9:15693936-15693995
-
67.51
63.24
0
Exon Skipping
385
chr9:15690272-15690656
-
99.93
1.63
1
Exon Skipping
327
chr9:15693936-15694262
-
82.1
85.71
0
Exon Skipping
87
chr9:15789330-15789416
-
71.77
38.36
0
Exon Skipping
103
chr9:15782639-15782741
-
10.34
34.15
0
Exon Skipping
55
chr9:15781147-15781201
-
13.04
46.51
0
Intron Retention
3220
chr9:15661472-15664691
-
16.41
17.86
0
Intron Retention
5061
chr9:15690657-15695717
-
11.45
28.73
0
Intron Retention
901
chr9:15689371-15690271
-
12.83
55
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000124496 TRERF1 1-to-1
Human hg19 ENSG00000124496 TRERF1 1-to-1
Cow bosTau6 ENSBTAG00000015321 TRERF1 1-to-1
Chicken galGal4 ENSGALG00000009896 TRERF1 1-to-1
Chicken galGal3 ENSGALG00000009896 TRERF1 1-to-1
Zebrafish danRer10 ENSDARG00000088631 TRERF1 1-to-1
Fruitfly dm6 FBgn0037698 CG16779 3-to-1