Special

ENSBTAG00000016800 @ bosTau6

Biotype
protein_coding
Gene Symbol
SEMA6D
Description
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:HGNC Symbol;Acc:HGNC:16770]
Coordinates
chr10:62863669-62920660:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
81.49
36.86
0
Alternative 3'ss
39
chr10:62871249-62871287
-
18.51
36.86
0
Alternative 5'ss
121
chr10:62869138-62869258
-
44.2
29.31
0
Alternative 5'ss
133
chr10:62869126-62869258
-
54.86
32.96
0
Exon Skipping
57
chr10:62870770-62870826
-
68.04
40.9
0
Exon Skipping
168
chr10:62869126-62869293
-
79.44
58.54
0
Intron Retention
360
chr10:62870827-62871186
-
11.33
23.08
0
Intron Retention
1476
chr10:62869294-62870769
-
18.55
37.61
0
Intron Retention
1734
chr10:62867392-62869125
-
22.05
26.59
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000137872 SEMA6D 1-to-1
Human hg19 ENSG00000137872 SEMA6D 1-to-1
Mouse mm10 ENSMUSG00000027200 Sema6d 1-to-1
Mouse mm9 ENSMUSG00000027200 Sema6d 1-to-1
Rat rn6 ENSRNOG00000004812 Sema6d 1-to-1
Chicken galGal4 ENSGALG00000004844 SEMA6D 1-to-1
Chicken galGal3 ENSGALG00000004844 SEMA6D 1-to-1
Zebrafish danRer10 ENSDARG00000011533 sema6dl 1-to-1
Fruitfly dm6 FBgn0011259 Sema-1a 4-to-2
Fruitfly dm6 FBgn0016059 Sema-1b 4-to-2