Special

ENSG00000137872 @ hg38

Biotype
protein_coding
Gene Symbol
SEMA6D
Description
semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
Coordinates
chr15:47184101-47774223:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
67.69
67.68
0
Alternative 3'ss
39
chr15:47766577-47766615
+
31.79
67.68
0
Exon Skipping
57
chr15:47767037-47767093
+
67.24
86.8
0
Exon Skipping
168
chr15:47768581-47768748
+
44.15
97.03
0
Exon Skipping
80
chr15:47412393-47412472
+
74.15
36.22
0
Exon Skipping
32
chr15:47600865-47600896
+
90.81
21.37
0
Exon Skipping
131
chr15:47241240-47241370
+
34.93
77.78
0
Exon Skipping
300
chr15:47571161-47571460
+
3.22
16.13
0
Exon Skipping
115
chr15:47574275-47574389
+
4.21
24.79
0
Exon Skipping
102
chr15:47576211-47576312
+
10.08
35.38
0
Exon Skipping
206
chr15:47718668-47718873
+
13.79
55.57
0
Intron Retention
229
chr15:47761432-47761660
+
9.93
36.93
0
Intron Retention
227974
chr15:47184419-47412392
+
9.94
16.97
0
Intron Retention
812
chr15:47765057-47765868
+
21.09
54.48
0
Intron Retention
394
chr15:47766183-47766576
+
16.52
46.48
0
Intron Retention
3819
chr15:47766678-47770496
+
21.38
94.12
0
Intron Retention
130319
chr15:47470546-47600864
+
7.55
22.43
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000027200 Sema6d 1-to-1
Mouse mm9 ENSMUSG00000027200 Sema6d 1-to-1
Rat rn6 ENSRNOG00000004812 Sema6d 1-to-1
Cow bosTau6 ENSBTAG00000016800 SEMA6D 1-to-1
Chicken galGal4 ENSGALG00000004844 SEMA6D 1-to-1
Chicken galGal3 ENSGALG00000004844 SEMA6D 1-to-1
Zebrafish danRer10 ENSDARG00000011533 sema6dl 1-to-1
Fruitfly dm6 FBgn0011259 Sema-1a 4-to-2
Fruitfly dm6 FBgn0016059 Sema-1b 4-to-2