Special

ENSG00000137872 @ hg19

Biotype
protein_coding
Gene Symbol
SEMA6D
Description
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:HGNC Symbol;Acc:16770]
Coordinates
chr15:48010686-48066417:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
69.15
54.28
0
Alternative 3'ss
39
chr15:48058774-48058812
+
30.85
54.28
0
Exon Skipping
57
chr15:48059234-48059290
+
69.22
86.95
0
Exon Skipping
168
chr15:48060778-48060945
+
47.82
97.18
0
Exon Skipping
80
chr15:47704590-47704669
+
78.73
36.52
0
Exon Skipping
32
chr15:47893062-47893093
+
92.21
19.2
0
Intron Retention
40871
chr15:48011071-48051941
+
16.91
50.62
0
Intron Retention
229
chr15:48053629-48053857
+
9.1
36.51
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000027200 Sema6d 1-to-1
Mouse mm9 ENSMUSG00000027200 Sema6d 1-to-1
Rat rn6 ENSRNOG00000004812 Sema6d 1-to-1
Cow bosTau6 ENSBTAG00000016800 SEMA6D 1-to-1
Chicken galGal4 ENSGALG00000004844 SEMA6D 1-to-1
Chicken galGal3 ENSGALG00000004844 SEMA6D 1-to-1
Zebrafish danRer10 ENSDARG00000011533 sema6dl 1-to-1
Fruitfly dm6 FBgn0011259 Sema-1a 4-to-2
Fruitfly dm6 FBgn0016059 Sema-1b 4-to-2