Special

ENSMUSG00000027200 @ mm9

Biotype
protein_coding
Gene Symbol
Sema6d
Description
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
Coordinates
chr2:123915705-124493506:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
89.8
43.75
0
Alternative 3'ss
39
chr2:124485980-124486018
+
10.2
43.75
0
Alternative 5'ss
0
NA
+
42.02
34.41
0
Alternative 5'ss
12
chr2:124488096-124488107
+
57.98
34.41
0
Exon Skipping
28
chr2:124315721-124315748
+
95.87
21.99
0
Exon Skipping
57
chr2:124486441-124486497
+
31.69
53.39
0
Exon Skipping
168
chr2:124487940-124488107
+
58.81
77.7
0
Intron Retention
359
chr2:124485621-124485979
+
13.57
31.82
0
Intron Retention
3259
chr2:124486498-124489756
+
49.76
70.5
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000137872 SEMA6D 1-to-1
Human hg19 ENSG00000137872 SEMA6D 1-to-1
Rat rn6 ENSRNOG00000004812 Sema6d 1-to-1
Cow bosTau6 ENSBTAG00000016800 SEMA6D 1-to-1
Chicken galGal4 ENSGALG00000004844 SEMA6D 1-to-1
Chicken galGal3 ENSGALG00000004844 SEMA6D 1-to-1
Zebrafish danRer10 ENSDARG00000011533 sema6dl 1-to-1
Fruitfly dm6 FBgn0011259 Sema-1a 4-to-2
Fruitfly dm6 FBgn0016059 Sema-1b 4-to-2