Special

ENSG00000033867 @ hg19

Biotype
protein_coding
Gene Symbol
SLC4A7
Description
solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:HGNC Symbol;Acc:11033]
Coordinates
chr3:27414214-27525911:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
80.72
42.03
0
Alternative 5'ss
12
chr3:27525558-27525569
-
19.28
42.03
0
Alternative 5'ss
0
NA
-
10.57
54.2
0
Alternative 5'ss
39
chr3:27475407-27475445
-
89.43
54.2
0
Exon Skipping
109
chr3:27525010-27525118
-
22.4
46.48
0
Exon Skipping
108
chr3:27420740-27420847
-
86.14
96
0
Exon Skipping
175
chr3:27450847-27451021
-
80.8
80
0
Exon Skipping
372
chr3:27472789-27473160
-
6.77
81.98
0
Exon Skipping
161
chr3:27477879-27478039
-
98
29.27
0
Exon Skipping
139
chr3:27478879-27479017
-
99
34.26
0
Exon Skipping
189
chr3:27475407-27475595
-
99.28
32.15
0
Intron Retention
4152
chr3:27493990-27498141
-
73.44
99.77
0
Intron Retention
6307
chr3:27418337-27424643
-
20.51
63.59
0
Intron Retention
2283
chr3:27475596-27477878
-
10.98
31.82
0
Intron Retention
2246
chr3:27473161-27475406
-
14.9
49.86
0
Intron Retention
7145
chr3:27465644-27472788
-
11.94
44.57
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000021733 Slc4a7 1-to-1
Mouse mm9 ENSMUSG00000021733 Slc4a7 1-to-1
Rat rn6 ENSRNOG00000005957 Slc4a7 1-to-1
Cow bosTau6 ENSBTAG00000018227 SLC4A7 1-to-1
Chicken galGal4 ENSGALG00000011405 SLC4A7 1-to-1
Chicken galGal3 ENSGALG00000011405 SLC4A7 1-to-1
Zebrafish danRer10 ENSDARG00000073952 slc4a7 1-to-1
Fruitfly dm6 FBgn0259111 Ndae1 6-to-1