HsaEX0044594 @ hg19

Exon Skipping

Gene

ENSG00000136811 | ODF2

Description

outer dense fiber of sperm tails 2 [Source:HGNC Symbol;Acc:8114]

Coordinates

chr9:131222792-131231632:+

Coord C1 exon

chr9:131222792-131222945

Coord A exon

chr9:131223221-131223289

Coord C2 exon

chr9:131231462-131231632

Length

69 bp

Sequences

Splice sites

3' ss Seq

GGGTTTGTCCCTTTCCACAGAAA

3' ss Score

9.98

5' ss Seq

AAGGTACCT

5' ss Score

8.49

Exon sequences

Seq C1 exon

ATCAACCATTTTTGTGTTGTCCTCCCCCACCTGCCAGAAGCCAACCATGAAGGACCGCTCTTCAACTCCCCCCTTACATGTTCACGTGGATGAGAACACCCCTGTCCACGTCCACATAAAAAAACTCCCGAAACCATCAGCGACCAGCAGCCAG

Seq A exon

AAATCTCACAAGCGAGGAATGAAAGGGGACACTGTGAATGTGCGGCGGAGTGTCCGGGTGAAAACCAAG

Seq C2 exon

AATCCACCTCATTGCCTGGAGATCACGCCACCATCTTCAGAAAAGCTGGTCTCAGTGATGCGGTTAAGTGACCTCTCTACAGAAGATGATGACTCAGGTCACTGTAAAATGAACCGTTATGATAAGAAGATTGATAGTCTAATGAATGCGGTTGGTTGTCTGAAGTCTGAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000136811-'6-13,'6-12,7-13

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.863 A=0.975 C2=0.640

Domain overlap (PFAM):

C1:

PF041569=IncA=PU(14.0=75.0),PF134761=AAA_23=PU(3.8=16.7)

A:

PF041569=IncA=FE(11.4=100),PF134761=AAA_23=FE(13.8=100)

C2:

PF041569=IncA=FE(29.0=100),PF104734=CENP-F_leu_zip=PU(24.0=43.9),PF0149614=V_ATPase_I=PU(22.2=49.1),PF041117=APG6=PU(27.2=64.9),PF134761=AAA_23=FE(35.2=100)

Main Inclusion Isoform:

ENSP00000307781