HsaEX0072612 @ hg38
Exon Skipping
Gene
ENSG00000066827 | ZFAT
Description
zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
Coordinates
chr8:134532834-134584005:-
Coord C1 exon
chr8:134583832-134584005
Coord A exon
chr8:134565333-134565421
Coord C2 exon
chr8:134532834-134532972
Length
89 bp
Sequences
Splice sites
3' ss Seq
TGTCCTCCGCTTCTTTCCAGGGA
3' ss Score
10.44
5' ss Seq
AAGGTAAGA
5' ss Score
10.57
Exon sequences
Seq C1 exon
GTGTGAAGCCCTTCAAGTGTTCTTTGTGTGAGTATGCAACTCGTAGCAAGAGTAACCTCAAGGCTCATATGAATCGTCACAGCACTGAGAAAACCCACCTATGTGACATGTGTGGCAAGAAATTCAAATCAAAAGGGACACTGAAAAGTCACAAACTCCTTCACACTGCAGATG
Seq A exon
GGAAGCAGTTTAAGTGCACGGTGTGTGACTACACAGCGGCCCAGAAGCCACAGCTGCTGCGGCACATGGAACAGCATGTCTCCTTCAAG
Seq C2 exon
CCTTTCCGCTGTGCCCATTGCCATTACTCCTGCAACATATCTGGCTCTCTGAAGCGGCACTACAACAGGAAGCACCCTAATGAGGAGTATGCCAACGTGGGCACCGGGGAGCTGGCAGCGGAGGTGCTCATCCAGCAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000066827_MULTIEX1-10/19=9-15
Average complexity
S
Mappability confidence:
88%=100=82%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.068 A=0.000 C2=0.213
Domain overlap (PFAM):
C1:
PF134651=zf-H2C2_2=PD(57.7=25.4),PF134651=zf-H2C2_2=WD(100=44.1)
A:
PF139091=zf-H2C2_5=WD(100=76.7)
C2:
NO
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ACAGCACTGAGAAAACCCACC
R:
CTTCCTGTTGTAGTGCCGCTT
Band lengths:
168-257
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development