HsaEX0073030 @ hg19

Exon Skipping

Gene

ENSG00000125846 | ZNF133

Description

zinc finger protein 133 [Source:HGNC Symbol;Acc:12917]

Coordinates

chr20:18269121-18297640:+

Coord C1 exon

chr20:18269121-18269248

Coord A exon

chr20:18286942-18287037

Coord C2 exon

chr20:18295713-18297640

Length

96 bp

Sequences

Splice sites

3' ss Seq

TTTTCTTTTCCTGTGAGCAGGAA

3' ss Score

8.24

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

CGCCGAGCATCCTGGGAGGTGTGGTCCGGGCGCTGTGCCGAGGATTCGGGGTAGTGTAGTCCTGGCGCCCCGCTGGAGGAGCTCCCCAGCTGGTGGCTGGAGCGACCCCTTGTTCTTTGGTGGCGCTG

Seq A exon

GAATTTCATTTTCTAAACCAGAACTCATCACCCAGCTGGAGCAAGGGAAAGAGACCTGGAGAGAGGAAAAAAAATGTTCACCGGCAACCTGTCCAG

Seq C2 exon

CAGATCCAGAGCCAGAGCTCTACCTCGATCCTTTCTGCCCTCCGGGTTTCTCCAGTCAGAAATTCCCCATGCAGCATGTGCTGTGTAATCATCCCCCCTGGATCTTCACATGCTTGTGTGCAGAAGGTAACATCCAGCCTGGGGATCCGGGCCCAGGGGACCAGGAGAAGCAGCAACAAGCCTCTGAGGGGAGACCCTGGAGTGATCAAGCAGAAGGTCCTGAGGGAGAAGGTGCCATGCCTTTGTTTGGAAGAACCAAGAAAAGGACTCTGGGAGCGTTCTCCAGGCCACCCCAGAGGCAGCCAGTCAGCTCTCGGAACGGCCTCAGAGGGGTGGAGTTAGAAGCCAGCCCAGCTCAGTCAGGGAACCCTGAGGAAACAGACAAATTGTTGAAGAGGATAGAAGTCTTAGGATTTGGAACAGTCAACTGTGGAGAGTGTGGACTGAGCTTCAGCAAGATGACAAACCTGCTCAGTCACCAGCGGATACACTCAGGGGAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000125846_MULTIEX1-6/8=C1-C2

Average complexity

C3*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

Show structural model

Features

Disorder rate (Iupred):

C1=NA A=0.424 C2=0.279

Domain overlap (PFAM):

C1:

NA

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.1),PF0009621=zf-C2H2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5)

Main Inclusion Isoform:

ENSP00000400897