HsaEX6044804 @ hg38

Exon Skipping

Gene

ENSG00000167377 | ZNF23

Description

zinc finger protein 23 [Source:HGNC Symbol;Acc:HGNC:13023]

Coordinates

chr16:71447597-71456828:-

Coord C1 exon

chr16:71456764-71456828

Coord A exon

chr16:71454042-71454168

Coord C2 exon

chr16:71447597-71449885

Length

127 bp

Sequences

Splice sites

3' ss Seq

GCAGGAACCTATTGTTTCAGAAG

3' ss Score

1.37

5' ss Seq

TGGGTAAGA

5' ss Score

8.91

Exon sequences

Seq C1 exon

CTCCAGCCCTTCTCTGAGACGGGGACCAGGGGATGGCAGCCATGCACCTGACAGCCTGGCCCCAG

Seq A exon

AAGTCGGTGACCTTTGAGGACGTGGCTGTGTACTTCACCCAGGCGGAATGGGATGGCCTGTCCCCTGCACAGAGGACCCTGTACAGGGATGTGATGCTGGAGAATTATGGGAATGTGGCCTCCCTGG

Seq C2 exon

TAGATATTCAGACTGACAATGATTTGACAAAGGAAATGTATGAAGGAAAAGAGAATGTATCATTTGAACTTCAAAGAGACTTTTCCCAGGAAACAGACTTTTCAGAAGCCTCTCTTCTAGAGAAACAACAGGAAGTCCACTCAGCAGGAAATATAAAGAAGGAGAAGAGCAACACCATTGATGGAACAGTGAAAGATGAGACAAGCCCCGTGGAGGAGTGTTTTTTTAGTCAAAGTTCAAACTCATATCAGTGTCATACCATCACTGGAGAGCAGCCCTCTGGGTGTACAGGATTGGGGAAATCCATCAGCTTTGATACAAAACTCGTGAAGCATGAAATAATTAATTCTGAGGAAAGACCTTTCAAATGTGAAGAATTAGTAGAGCCCTTTAGGTGTGACTCTCAACTTATTCAACATCAAGAGAACAACACTGAGGAAAAGCCTTATCAGTGTTCGGAGTGTGGCAAAGCTTTCAGCATTAATGAGAAATTAATTTGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000167377_MULTIEX1-2/3=C1-C2

Average complexity

C3*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref, Alt. ATG (>10 exons))

No structure available

Features

Disorder rate (Iupred):

C1=NA A=0.000 C2=0.122

Domain overlap (PFAM):

C1:

NA

A:

NO

C2:

PF079757=C1_4=WD(100=7.7),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF0009621=zf-C2H2=WD(100=3.9)

Main Inclusion Isoform:

ENSP00000349796