HsaEX6095856 @ hg38

Exon Skipping

Gene

ENSG00000118156 | ZNF541

Description

zinc finger protein 541 [Source:HGNC Symbol;Acc:HGNC:25294]

Coordinates

chr19:47520685-47521994:-

Coord C1 exon

chr19:47521854-47521994

Coord A exon

chr19:47521479-47521654

Coord C2 exon

chr19:47520685-47521377

Length

176 bp

Sequences

Splice sites

3' ss Seq

CACTTTTGCTCCCTCTGCAGGTC

3' ss Score

11.2

5' ss Seq

AAGGTACCC

5' ss Score

9.16

Exon sequences

Seq C1 exon

ATCCAGACAAAGACGGTAGCTCAGTGCGTTGAGTATTATTACATCTGGAAAAAAATGATCAAGTTTGACTGTGGCCGAGCCCCAGGGCTAGAAAAGAGGGTCAAGAGAGAGCCGGAGGAAGTGGAAAGGACAGAGGAAAAG

Seq A exon

GTCCCATGCAGCCCTCGGGAGAGACCCAGCCACCATCCAACTCCCAAGTTAAAGACCAAGAGTTATAGGAGGGAGTCCATCCTCAGCTCCAGCCCAAATGCAGGCTCCAAGCGGACCCCCGAGCTGTTGGGAAGTGCAGAGAGCCAGGGCATTTTTCCATGCAGAGAGTGTGAAAG

Seq C2 exon

GGTGTTTGACAAGATCAAGAGTCGAAATGCCCATATGAAGCGGCACCGCCTTCAGGACCACGTGGAGCCCATCATCAGGGTGAAGTGGCCAGTGAAGCCCTTCCAGCTAAAGGAAGAGGAGCTGGGAGCTGACATCGGCCCCCTGCAGTGGTGACTCCCGTGGCAGCAAGTCCGAATGGGGCCTCCAGTGCTGCCCCTCCTCCCTTCGGCCTCTCCAGGGCGTTTGGGGCACCCCTCTGCCTCCCCCCACCCTCCCTGTCCCCTGTTGGCCAACCTGCCTGCAAACATGGAGGGCATTTGGCCACAGATAGGCAGGAGGAGCTCAGTTGTCGGACAGCTATGCAGTCCCTGTCCGGTGGTGCTGGAGGCTCCACTCTCCTTAGGTTCATAGTCTCTCCCCTTCTTTCCCTTCCACTTCTAGAGCAGGGAGGCTTGGGGAGGGGAAAATTTAGCTCTGGGTAGCTCTTAAATCTTAGCCTCAGTTGTGGGGTTTGGTTTCA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000118156-'28-24,'28-23,29-24

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. Stop)

No structure available

Features