MmuEX6026991 @ mm9
Exon Skipping
Gene
ENSMUSG00000036815 | Dpp10
Description
dipeptidylpeptidase 10 [Source:MGI Symbol;Acc:MGI:2442409]
Coordinates
chr1:125299410-125320287:-
Coord C1 exon
chr1:125320190-125320287
Coord A exon
chr1:125308288-125308411
Coord C2 exon
chr1:125299410-125299448
Length
124 bp
Sequences
Splice sites
3' ss Seq
TTTTTTTGTTTCCAAACTAGAGA
3' ss Score
6.89
5' ss Seq
AGGGTGAGT
5' ss Score
9.25
Exon sequences
Seq C1 exon
GCAGGTCAAGCGAACCCATCAGTGAAGTTATATGTTGTAAACCTGTATGGACCAACTCATACTTTGGAGCTGATGCCACCCGACATTTTTAAATCAAG
Seq A exon
AGAATATTACATCACCATGGTTAAATGGGTGAGCAACACGAGGACAGTGGTCAGGTGGTTGAATCGGCCTCAGAACATCTCCATCCTCACACTCTGTGAATCTACCACCGGGGCATGCAGCAGG
Seq C2 exon
AAATATGAGATGACGTCCGACACCTGGCTCTCTAAACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000036815-'13-14,'13-13,15-14=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0093016=DPPIV_N=FE(8.7=100)
A:
PF0093016=DPPIV_N=FE(11.1=100)
C2:
PF0093016=DPPIV_N=FE(3.3=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Primers PCR
Suggestions for RT-PCR validation
F:
CAGGTCAAGCGAACCCATCAG
R:
TTAGAGAGCCAGGTGTCGGAC
Band lengths:
132-256
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs: