DmeEX6008293 @ dm6

Exon Skipping

Gene

Description

This gene is referred to in FlyBase by the symbol DmelCG17684 (FBgn0263780). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (2 unique). Gene sequence location is 2R:1866080..2262115. Its molecular function is described by: serine-type peptidase activity. It is involved in the biological process described with: proteolysis. 5 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: viable; fertile.

Coordinates

chr2R:1995173-1995906:-

Coord C1 exon

chr2R:1995612-1995906

Coord A exon

chr2R:1995419-1995551

Coord C2 exon

chr2R:1995173-1995361

Length

133 bp

Sequences

Splice sites

3' ss Seq

TTTCTTGATTTGTATACTAGAGA

3' ss Score

4.94

5' ss Seq

GAAGTAAGT

5' ss Score

9.82

Exon sequences

Seq C1 exon

AAGAAATTTTTGAAACTCCAGAGGCGATTTGGACATCGTCTGATGGAACACATTTTATGTACGCACTATTTAATGACACCAATGTCGGAATGATGACGTACCCGTGGTTATCGTCTGGAGCTTTATTCTCTGGAAGTGGGATATTTTCTGGAAGTATTTTTCCCGAAACAAAAATGGTTAGATTTCCAACTCCAGGAACCACTAATCCCGAAGTGGAGTTGTGGGCAGTTGACATAACTAATCTGAGCGACATTCAAAAATTTAATATTAAACCTCCTGCCACTATTTATGGACA

Seq A exon

AGACTATTACCTCACATCAGCAGGTTGGATATCTGATAGCAATTGTCAAGTATCGGTTGTTTATATGGGAAGATCTCAAAATTACAGTGTTATTTCATTGTGTTCTAAAGAAGAAGACTGGAAATGCTTGGAA

Seq C2 exon

GTTCACTCCGAACGTGCACCAGAAGATGAATGGTTGGATATCTTTCCCCACCCGGTATTTTCTTCAGACGGTAGCAGTTTCTTATTTTTGGCGAATATTCAGGAGTCAGAAAACTACCAATTTACACATATTAAACATGTAATGATATCACAGCGAAGAATTTCTGTTATTTCTCATGGTCGATATGAA

VastDB Features

Vast-tools module Information

Secondary ID

FBgn0263780-'17-21,'17-18,18-21=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features